Publikationen
_{Molekularbiologie}

Becker, C.; Hagmann, J.; Müller, J.; Koenig, D.; Stegle, O.; Borgwardt, K.; Weigel, D.: Spontaneous epigenetic variation in the Arabidopsis thaliana methylome. Nature 480 (7376), S. 245 - 249 (2011)

Rubio-Somoza, I.; Weigel, D.; Franco-Zorilla, J.-M.; García, J.; Paz-Ares, J.: ceRNAs: miRNA target mimic mimics. Cell 147 (7), S. 1431 - 1432 (2011)

Grbić, M.; Van Leeuwen, T.; Clark, R.; Rombauts, S.; Rouzé, P.; Grbić, V.; Osborne, E.; Dermauw, W.; Ngoc, P.; Ortego, F. et al.; Hernández-Crespo, P.; Diaz, I.; Martinez, M.; Navajas, M.; Sucena, É.; Magalhães, S.; Nagy, L.; Pace, R.; Djuranovic, S.; Smagghe, G.; Iga, M.; Christiaens, O.; Veenstra, J.; Ewer, J.; Mancilla Villalobos, R.; Hutter, J.; Hudson, S.; Velez, M.; Yi, S.; Zeng, J.; Pires-daSilva, A.; Roch, F.; Cazaux, M.; Navarro, M.; Zhurov, V.; Acevedo, G.; Bjelica, A.; Fawcett, J.; Bonnet, E.; Martens, C.; Baele, G.; Wissler, L.; Sanchez-Rodriguez, A.; Tirry, L.; Blais, C.; Demeestere, K.; Henz, S.; Gregory, T.; Mathieu, J.; Verdon, L.; Farinelli, L.; Schmutz, J.; Lindquist, E.; Feyereisen, R.; Van de Peer, V.: The genome of Tetranychus urticae reveals herbivorous pest adaptations. Nature 479 (7374), S. 487 - 492 (2011)

Maier, A.; Stehling-Sun, S.; Offenburger, S.-L.; Lohmann, J.: The bZIP Transcription Factor PERIANTHIA: A Multifunctional Hub for Meristem Control. Frontiers in Plant Science 2, 79 (2011)

Ponnu, J.; Wahl, V.; Schmid, M.: Trehalose-6-phosphate: connecting plant metabolism and development. Frontiers in Plant Science 2, 70 (2011)

Cao, J.; Schneeberger, K.; Ossowski, S.; Günther, T.; Bender, S.; Fitz, J.; König, D.; Lanz, C.; Stegle, O.; Lippert, C. et al.; Wang, X.; Ott, F.; Müller, J.; Alonso-Blanco, C.; Borgwardt, K.; Schmid, K.; Weigel, D.: Whole-genome sequencing of multiple Arabidopsis thaliana populations. Nature Genetics 43 (10), S. 956 - 963 (2011)

Guo, Y.-L.; Fitz, J.; Schneeberger, K.; Ossowski, S.; Cao, J.; Weigel, D.: Genome-wide comparison of nucleotide-binding site-leucine-rich repeat-encoding genes in Arabidopsis. Plant Physiology 157 (2), S. 757 - 769 (2011)

Guo, Y.-L.; Zhao, X.; Lanz, C.; Weigel, D.: Evolution of the S-locus region in Arabidopsis relatives. Plant Physiology 157 (2), S. 937 - 946 (2011)

Huijser, P.; Schmid, M.: The control of developmental phase transitions in plants. Development 138 (19), S. 4117 - 4129 (2011)

Davila, J.; Arrieta-Montiel, M.; Wamboldt, Y.; Cao, J.; Hagmann, J.; Shedge, V.; Xu, Y.-Z.; Weigel, D.; Mackenzie, S.: Double-strand break repair processes drive evolution of the mitochondrial genome in Arabidopsis. BMC Biology 9, 64 (2011)

Gan, X.; Stegle, O.; Behr, J.; Steffen, J.; Drewe, P.; Hildebrand, K.; Lyngsoe , R.; Schultheiss, S.; Osborne, E.; Sreedharan, V. et al.; Kahles, A.; Bohnert, R.; Jean, G.; Derwent, P.; Kersey, P.; Belfield, E.; Harberd, N.; Kemen, F.; Toomajian, C.; Kover , P.; Clark, R.; Rätsch, G.; Mott, R.: Multiple reference genomes and transcriptomes for Arabidopsis thaliana. Nature 477 (7365), S. 419 - 423 (2011)

Shervashidze, N.; Schweitzer, P.; van Leeuwen , E.; Mehlhorn, K.; Borgwardt, M.: Weisfeiler-Lehman Graph Kernels. The Journal of Machine Learning Research 12, S. 2539 - 2561 (2011)

Klein, J.; Ossowski, S.; Schneeberger, K.; Weigel, D.; Huson, D.: LOCAS: A Low Coverage Assembly Tool for Resequencing Projects. PLOS ONE 6 (8), e23455 (2011)

Willing, E.-M.; Hoffmann, M.; Klein, J.; Weigel, D.; Dreyer, C.: Paired-end RAD-seq for de novo assembly and marker design without available reference. Bioinformatics 27 (16), S. 2187 - 2193 (2011)

Rowan, B.; Weigel, D.; Koenig, D.: Developmental genetics and new sequencing technologies: the rise of nonmodel organisms. Developmental Cell 21 (1), S. 65 - 76 (2011)

Smith, L.; Bomblies, K.; Weigel, D.: Complex evolutionary events at a tandem cluster of Arabidopsis thaliana genes resulting in a single-locus genetic incompatibility. PLoS Genetics 7 (7), e1002164 (2011)

Salomé, P.; Bomblies, K.; Laitinen, R.; Yant, L.; Mott, R.; Weigel, D.: Genetic architecture of flowering-time variation in Arabidopsis thaliana. Genetics 188 (2), S. 421 - 433 (2011)

Schneeberger, K.; Ossowski, S.; Ott, F.; Klein, J.; Wang, X.; Lanz, C.; Smith, L.; Cao, J.; Fitz, J.; Warthmann, N. et al.; Henz, S.; Huson, D.; Weigel, D.: Reference-guided assembly of four diverse Arabidopsis thaliana genomes. Proceedings of the National Academy of Sciences of the United States of America 108 (25), S. 10249 - 10254 (2011)

Srikanth, A.; Schmid, M.: Regulation of flowering time: all roads lead to Rome. Cellular and Molecular Life Sciences 68 (12), S. 2013 - 2037 (2011)

Hu, T.; Pattyn, P.; Bakker, E.; Cao, J.; Cheng, J.-F.; Clark, R.; Fahlgren, N.; Fawcett, J.; Grimwood, J.; Gundlach, A. et al.; Haberer, D.; Hollister, J.; Ossowski, S.; Ottilar, R.; Salamov, A.; Schneeberger, K.; Spannagl, M.; Wang, X.; Yang, L.; Nasrallah, M.; Bergelson, J.; Carrington, J.; Gaut, B.; Schmutz, J.; Mayer, K.; Van de Peer, Y.; Grigoriev, I.; Nordborg, M.; Weigel, D.; Guo, Y.-L.: The Arabidopsis lyrata genome sequence and the basis of rapid genome size change. Nature Genetics 43 (5), S. 476 - 481 (2011)