Publikationen von G Rätsch

Schweikert, G.; Zeller, G.; Zien, A.; Ong, C.; De Bona, F.; Sonnenburg, S.; Philips, P.; Rätsch, G.: mGene: A Novel Discriminative Ab-initio Gene Finding System. In Automated Function Prediction: Biosapiens Joint Special Interest Group Meeting, S. 36 - 37. Automated Function Prediction: Biosapiens Joint Special Interest Group Meeting, Wien, Austria, 19. Juli 2007 - 20. Juli 2007. (2007)

Zeller, G.; Schweikert, G.; Clark, R.; Ossowski, S.; Shin, P.; Frazer, K.; Ecker, J.; Weigel, D.; Schölkopf, B.; Rätsch, G.: Machine Learning Algorithms for Polymorphism Detection. NIPS 2007 Workshop on Machine Learning in Computational Biology (MLCB 2007), Whistler, Canada (2007)

Schweikert, G.; Zeller, G.; Zien, A.; Ong, C.; De Bona, F.; Sonnenburg, S.; Phillips, P.; Rätsch, G.: Ab-initio gene finding using machine learning. NIPS 2006 Workshop on New Problems and Methods in Computational Biology (MLCB 2006), Vancouver, BC, Canada (2006)

Rätsch, G.; Gan, X.; Stegle, O.; Behr, J.; Drewe, P.; Drewe, P.; Steffen, J.; Clark, R.; Osborne, E.; Schultheiss, S. et al.; Sreedharan, V.; Kahles, A.; Bohnert, R.; Jean, G.; Hildebrand, K.; Toomajian, C.; Lyngsoe, R.; Derwent, P.; Kersey, P.; Belfield, E.; Harberd, N.; Kemen, E.; Kover, P.: Multiple reference genomes and transcriptomes for Arabidopsis thaliana. 20th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB 2012), Long Beach, CA, USA (2012)

Behr, J.; Bohnert, R.; Kahles, A.; Schweikert, G.; Zeller, G.; Hartmann, L.; Rätsch, G.: Accurate RNA-seq based de novo annotation using mGene.ngs. 19th Annual International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology (ISMB/ECCB 2011), Wien, Austria (2011)

Jean, G.; Raetsch, G.; Kahles, A.; Sonnenburg, S.; Schneeberger, K.; Hagmann, J.; De Bona, F.; Weigel, D.: Fast and Accurate RNA-Seq alignments with PALMapper. 19th Annual International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology (ISMB ECCB 2011), Wien, Austria (2011)

Drewe, P.; Stegle, O.; Behr, J.; Clark, R.; Rätsch, G.; Mott, R.: Multiple reference genomes and transcriptomes for Arabidopsis thaliana. 4th Berlin Summer Meeting: “Computational & Experimental Molecular Biology Meet”, Berlin, Germany (2011)

Drewe, P.; Stegle, O.; Bohnert, R.; Borgwardt, K.; Rätsch, G.: Statistical tests for detecting differential RNA-transcript expression. 4th Berlin Summer Meeting: “Computational & Experimental Molecular Biology Meet”, Berlin, Germany (2011)

Reinke, V.; Ewing, B.; Gerstein, M.; Green, P.; Henz, S.; High, A.; Hillier, L.; Kato, M.; Leng, J.; MacCoss, M. et al.; Merrihew, G.; Miller, D.; Rätsch, G.; Robilotto, R.; Slack, F.; Spencer, W.; Strasbourger, P.; Thompson, O.; Wang, G.; Zeller, G.; Waterston, R.: The C. elegans transcriptome. 18th International C. Elegans Meeting, Los Angeles, CA, USA (2011)

Behr, J.; Zeller, G.; Schweikert, G.; Hartmann, L.; Smith, L.; Rätsch, G.: De Novo RNA-seq-based genome annotation. Joint Cold Spring Harbor Laboratory/Wellcome Trust Conference: Genome Informatics, Hinxton, UK (2010)

Stegle, O.; Drewe, P.; Bohnert, R.; Borgwardt, K.; Rätsch, G.: Statistical Tests for Detecting Differential RNA-Transcript Expression from Read Counts. Joint Cold Spring Harbor Laboratory/Wellcome Trust Conference: Genome Informatics, Hinxton, UK (2010)

Drewe, P.; Stegle, O.; Bohnert, R.; Borgwardt, K.; Rätsch, G.: Statistical Tests for Detecting Differential RNA-Transcript Expression from Read Counts. 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB 2010), Boston, MA, USA (2010)

Rätsch, G.; Jean, G.; Kahles, A.; Sonnenburg, S.; De Bona, F.; Schneeberger, K.; Hagmann, J.; Weigel, D.: PALMapper: Fast and Accurate Spliced Alignments of Sequence Reads. 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB 2010), Boston, MA, USA (2010)

Laubinger, S.; Zeller, G.; Henz, S.; Sachsenberg, T.; Rätsch, G.; Weigel, D.: Transcriptome profiling of RNA-processing mutants: Uncovering the hidden layer of the Arabidopsis transcriptome. 20th International Conference on Arabidopsis Research (ICAR 2009), Edinburgh, UK (2009)

De Bona, F.; Ossowski, S.; Schneeberger, K.; Rätsch, G.: Optimal spliced alignments of short sequence reads. 16th Annual International Conference Intelligent Systems for Molecular Biology (ISMB 2008) , Toronto, Canada (2008)

Laubinger, S.; Sachsenberg, T.; Zeller, G.; Busch, W.; Lohmann, J.; Rätsch, G.; Weigel, D.: Dual roles of the nuclear cap-binding complex and SERRATE in pre-mRNA splicing and microRNA processing in Arabidopsis thaliana. 19th International Conference on Arabidopsis Research (ICAR 2008), Montreal, Canada (2008)

Schweikert, G.; Zien, A.; Zeller, G.; Ong, C.; De Bona, F.; Sonnenburg, S.; Philips, P.; Rätsch, G.: mGene: A Novel Discriminative Gene Finding System. 15th Annual International Conference on Intelligent Systems for Molecular Biology, 6th Annual European Conference on Computational Biology (ISMB/ECCB 2007), Wien, Austria (2007)

Rätsch, G.; Sonnenburg, S.; Srinivasan, J.; Müller, K.-R.; Sommer, R.; Schölkopf, B.: Splice Form Prediction using Machine Learning. 14th International Conference on Intelligent Systems for Molecular Biology (ISMB 2006), Fortaleza, Brazil (2006)

Zeller, G.; Schweikert, G.; Clark, R.; Ossowski, S.; Warthmann, N.; Shinn, P.; Frazer, K.; Ecker, J.; Huson, D.; Weigel, D. et al.; Schölkopf, B.; Rätsch, G.: Machine Learning Algorithms for Polymorphism Detection. 14th International Conference on Intelligent Systems for Molecular Biology (ISMB 2006), Fortaleza, Brazil (2006)

Clark, R.; Ossowski, S.; Schweikert, G.; Zeller, G.; Shinn , P.; Rätsch, G.; Warthmann, N.; Fu, G.; Hinds, D.; Cheng, H. et al.; Frazer, K.; Toomajian, C.; Hu, T.; Huson, D.; Schölkopf, B.; Nordborg, M.; Ecker, J.; Weigel, D.: An Inventory of Common Sequence Polymorphisms for Arabidopsis. 17th International Conference on Arabidopsis Research (ICAR 2006), Madison, WI, USA (2006)