Publications
Algal Development and Evolution

Journal Article (8)

1.
Journal Article
Vigneau, J.; Martinho, C.; Godfroy, O.; Zheng, M.; Haas, F.; Borg, M.; Coelho, S.: Interactions between U and V sex chromosomes during the life cycle of Ectocarpus. Development 151 (20), dev202677 (2024)
2.
Journal Article
Ohlsson, J.; Leong, J.; Elander, P.; Ballhaus, F.; Holla, S.; Dauphinee, A.; Johansson, J.; Lommel, M.; Hofmann, G.; Betnér, S. et al.; Sandgren, M.; Schumacher, K.; Bozhkov, P.; Minina, E.: SPIRO: the automated Petri plate imaging platform designed by biologists, for biologists. The Plant Journal 118 (2), pp. 584 - 600 (2024)
3.
Journal Article
Coelho, S.: The brown seaweed Ectocarpus. Nature Methods 21 (3), pp. 363 - 364 (2024)
4.
Journal Article
Luthringer, R.; Raphalen, M.; Guerra, C.; Colin, S.; Martinho, C.; Zheng, M.; Hoshino, M.; Badis, Y.; Lipinska, A.; Haas, F. et al.; Barrera-Redondo, J.; Alva, V.; Coelho, S.: Repeated co-option of HMG-box genes for sex determination in brown algae and animals. Science 283 (6689), eadk5466 (2024)
5.
Journal Article
Bi, G.; Zhao, S.; Jao, J.; Wang, H.; Zhao, M.; Sun, Y.; Hou, X.; Haas, F.; Varshney, D.; Prigge, M. et al.; Rensing, S.; Jiao, Y.; Ma, Y.; Yan, J.; Dai, J.: Near telomere-to-telomere genome of the model plant Physcomitrium patens. Nature Plants 10 (2), pp. 327 - 343 (2024)
6.
Journal Article
Bukhman, Y.; Meyer, S.; Chu, L.-F.; Abueg, L.; Antosiewicz-Bourget, J.; Balacco, J.; Brecht, M.; Dinatale, E.; Fedrigo, O.; Formenti, G. et al.; Fungtammasan, A.; Giri, S.; Hiller, M.; Howe, K.; Kihara, D.; Mammot, D.; Mountcastle , J.; Pelan, S.; Rabbani, K.; Sims, Y.; Tracey, A.; Wood, J.; Jarvis, E.; Thomson, J.; Chaisson, M.; Stewart, R.: Chromosome level genome assembly of the Etruscan shrew Suncus etruscus. Scientific Data 11 (1), 176 (2024)
7.
Journal Article
Hoshino, M.; Wakeman, K.; Kato, A.; Kitayama, T.; Sherwood, A.; Uwai, S.; Kogame, K.: Taxonomic study of the polyphyletic Dudresnaya (Dumontiaceae, Florideophyceae) with descriptions of Dudresnaya ryukyuensis sp. nov. and two new genera, Himehibirhodia and Nudresdaya. Phycological Research Epub ahead (2024)
8.
Journal Article
Voichek, Y.; Huriev, B.; Michaud, C.; Schmücker, A.; Vargara, Z.; Desvoyes, B.; Guttierez, C.; Nizhynska, V.; Jaegle, B.; Borg, M. et al.; Berger, F.; Nordborg, M.; Ingouff, M.: Cell-cycle status of male and female gametes during Arabidopsis reproduction. Plant Physiology 194 (1), kiad512, pp. 412 - 421 (2024)

Meeting Abstract (4)

9.
Meeting Abstract
Kane, E.: Structural and Mechanistic Insights of the Ectocarpus Sp. Meiotic Checkpoint Network. In Meiosis (GRS) Gordon Research Seminar: Molecular Mechanisms and Regulation of Sexual Reproduction. Meiosis (GRS) Gordon Research Seminar: Molecular Mechanisms and Regulation of Sexual Reproduction , New London, NH, USA, June 01, 2024 - June 02, 2024. (2024)
10.
Meeting Abstract
Borg, M.: Illuminating biology of the red algae: the “forgotten” plant lineage. In EMBO EMBL Symposium: Diversity of plants: from genomes to metabolism. EMBO EMBL Symposium: Diversity of plants: from genomes to metabolism , Heidelberg, Germany, April 09, 2024 - April 12, 2024. (2024)
11.
Meeting Abstract
Borg, M.: Genomic Adaptations Underlying Red Algal Diversity. In Plant and Animal Genome 31 Conference (PAG 2024). Plant and Animal Genome 31 Conference (PAG 2024), San Diego, CA, USA, January 13, 2018 - January 17, 2018. (2024)
12.
Meeting Abstract
Craig, R.; Gallaher, S.; Dueñas, M.; Camacho, D.; Merchant, S.; Moseley, J.: Hybridisation, loss-of-heterozygosity and aneuploidy in Auxenochlorella, an emerging green algal model for molecular genetics and biotechnology. In Population Genetics Group 57 (PopGroup57), 220, p. 169. Population Genetics Group 57 (PopGroup57), St. Andrews, Scotland, January 08, 2024 - January 10, 2024. (2024)

Poster (3)

13.
Poster
Petroll, R.: Genomic evolution underlying red algal species diversity. EMBO EMBL Symposium: Diversity of plants: from genomes to metabolism , Heidelberg, Germany (2024)
14.
Poster
Barrera Redondo, J.; Lipinska, A.; Liu, P.; Dinatale, E.; Cossard, G.; Bogaert, K.; Hoshino, M.; Avia, K.; Leiria, G.; Haas, F. et al.; Avdievich, E.; Liesner, D.; Luthringer, R.; Godfroy, O.; Heesch, S.; Nehr, Z.; Pearson, G.; Peters, A.; Denoeud, F.; Cock, M.; Coelho, S.: Tracing the Origins and Dynamic Evolution of UV Sex Chromosomes in Brown Algae and Their Intricate Connection to Sexual Dimorphism. Population Genetics Group 57 (PopGroup57), St. Andrews, Scotland (2024)
15.
Poster
Molinier, C.; Reynes, L.; Chan, Y.; Kucka, M.; Coudret, J.; Haas, F.; Luthringer, R.; Coelho, S.; Valero, M.; Lipinska, A.: Mitochondrial genomes and comparative population analyses shed light on hybridization and speciation in Ectocarpus species. Population Genetics Group 57 (PopGroup57), St. Andrews, Scotland (2024)

Preprint (8)

16.
Preprint
Feng, X.; Zheng, J.; Irisarri, I.; Yu, H.; Zheng, B.; Ali, Z.; de Vries, S.; Keller, J.; Fürst-Jansen, J.; Dadras, A. et al.; Zegers, J.; Rieseberg, T.; Ashok, A.; Darienko, T.; Bierenbroodspot, M.; Gramzow, L.; Petroll, R.; Haas, F.; Fernandez-Pozo, N.; Nousias, O.; Li, T.; Fitzek, W.; Grayburn, W.; Rittmeier, N.; Permann, C.; Rümpler, F.; Archibald, J.; Theißen, G.; Mower, J.; Lorenz, M.; Buschmann, H.; von Schwartzenberg, K.; Boston, L.; Hayes, R.; Daum, C.; Barry, K.; Grigoriev, I.; Wang, X.; Li, F.-E.; Rensing, S.; Ben Ari, J.; Keren, N.; Mosquna, A.; Holzinger, A.; Delaux, P.-M.; Zhang, C.; Huang, J.; Mutwil, M.; de Vries, J.; Yin, Y.: Chromosome-level genomes of multicellular algal sisters to land plants illuminate signaling network evolution. (2024)
17.
Preprint
Dries, E.; Meyers, Y.; Liesner, D.; Gonzaga, F.; Becker, J.; Zakka, E.; Coelho, S.; De Clerck, O.; Bogaert, K.: Cell wall-mediated maternal control of apical-basal patterning of the kelp Undaria pinnatifida. (submitted)
18.
Preprint
Lotharukpong, J.; Zheng, M.; Luthringer, R.; Haas, F.; Drost, H.-G.; Coelho, S.: A Transcriptomic Hourglass In Brown Algae. (submitted)
19.
Preprint
Mazéas, L.; Bouguerba-Collin, A.; Cock, J.; Denoeud, F.; Godfroy, O.; Brillet-Guéguen, L.; Barbeyron, T.; Lipinska, A.; Delage, L.; Corre, E. et al.; Drula, E.; Henrissat, B.; Czjzek, M.; Terrapon, N.; Hervé, C.: Evolutionary history of the main extracellular matrix polysaccharides in brown algae. (submitted)
20.
Preprint
Rieseberg, T.; Dadras, A.; Darienko, T.; Post, S.; Herrfurth, C.; Fürst-Jansen, J.; Hohnhorst, N.; Petroll, R.; Rensing, S.; Pröschold, T. et al.; de Vries, S.; Irisarri, I.; Feussner, I.; de Vries, J.: Time-resolved oxidative signal convergence across the algae–embryophyte divide. (submitted)
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