Publications of A Lipinska

Denoeud, F.; Godfroy, O.; Cruaud, C.; Heesch, S.; Nehr, Z.; Tadrent, N.; Couloux, A.; Brillet-Guéguen, L.; Delage, L.; Mckeown, D. et al.; Motomura, T.; Sussfeld, D.; Fan, X.; Mazéas, L.; Terrapon, N.; Barrera-Redondo, J.; Petroll, R.; Reynes, L.; Choi, S.-W.; Jo, J.; Uthanumallian, K.; Bogaert, K.; Duc, C.; Ratchinski, P.; Lipinska, A.; Noel, B.; Murphy, E.; Lohr, M.; Khatei, A.; Hamon-Giraud, P.; Vieira, C.; Avia, K.; Akerfors, S.; Akita, S.; Badis, Y.; Barbeyron, T.; Belcour, A.; Berrabah, W.; Blanquart, S.; Bouguerba-Collin, A.; Bringloe, T.; Cattolico, R.; Cormier, A.; Cruz de Carvalho, H.; Dallet, R.; De Clerck, O.; Debit, A.; Denis, E.; Destombe, C.; Dinatale, E.; Dittami, S.; Drula, E.; Faugeron, S.; Got, J.; Graf, L.; Groisillier, A.; Guillemin, M.-L.; Harms, L.; Hatchett, W.; Henrissat, B.; Hoarau, G.; Jollivet, C.; Jueterbock, A.; Kayal, E.; Knoll, A.; Kogame, K.; Le Bars, A.; Leblanc, C.; Le Gall, L.; Ley, R.; Liu, X.; LoDuca, S.; Lopez, P.; Lopez, P.; Manirakiza, E.; Massau, K.; Mauger, S.; Mest, L.; Michel, G.; Monteiro, C.; Nagasato, C.; Nègre, D.; Pelletier, E.; Phillips, N.; Potin, P.; Rensing, S.; Rousselot, E.; Rousvoal, S.; Schroeder, D.; Scornet, D.; Siegel, A.; Tirichine, L.; Tonon, T.; Valentin, K.; Verbruggen, H.; Weinberger, F.; Wheeler, G.; Kawai, H.; Peters, A.; Yoon, H.; Hervé, C.; Ye, N.; Bapteste, E.; Valero, M.; Markov, G.; Corre, E.; Coelho, S.; Wincker, P.; Aury, J.-M.; Cock, J.: Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems. Cell 187 (24), pp. 6943 - 6965 (2024)

Mazéas, L.; Bouguerba-Collin, A.; Cock, J.; Denoeud, F.; Godfroy, O.; Brillet-Guéguen , L.; Barbeyron, T.; Lipinska, A.; Delage, L.; Corre, E. et al.; Drula, E.; Henrissat, B.; Czjzek, M.; Terrapon, N.; Hervé, C.: Candidate genes involved in biosynthesis and degradation of the main extracellular matrix polysaccharides of brown algae and their probable evolutionary history. BMC Genomics 25 (1), 950 (2024)

Luthringer, R.; Raphalen, M.; Guerra, C.; Colin, S.; Martinho, C.; Zheng, M.; Hoshino, M.; Badis, Y.; Lipinska, A.; Haas, F. et al.; Barrera-Redondo, J.; Alva, V.; Coelho, S.: Repeated co-option of HMG-box genes for sex determination in brown algae and animals. Science 283 (6689), eadk5466 (2024)

Borg, M.; Krueger-Hadfield, S.; Destombe, C.; Collén, J.; Lipinska, A.; Coelho, S.: Red macroalgae in the genomic era. New Phytologist 240 (2), pp. 471 - 488 (2023)

Reifová, R.; Ament-Velásquez, S.; Bourgeois, Y.; Coughlan, J.; Kulmuni, J.; Lipinska, A.; Okude, G.; Stevison, L.; Yoshida, K.; Kitano, J.: Mechanisms of Intrinsic Postzygotic Isolation: From Traditional Genic and Chromosomal Views to Genomic and Epigenetic Perspectives. Cold Spring Harbor Perspectives in Biology 15 (10), a041607 (2023)

Lipinska, A.; Krueger-Hadfield, S.; Godfroy, O.; Dittami, S.; Ayres-Ostrock, L.; Bonthond, E.; Brillet-Guéguen, L.; Coelho, S.; Corre, E.; Cossard, G. et al.; Destombe, C.; Epperlein, P.; Faugeron, S.; Ficko-Blean, E.; Beltrán, J.; Lavaut, E.; Le Bars, A.; Marchi, F.; Mauger, S.; Michel, G.; Potin, P.; Scornet, D.; Sotka, E.; Weinberger, F.; Cabral de Oliveira, M.; Guillemin, M.-L.; Plastino, E.; Valero, M.: The Rhodoexplorer platform for red algal genomics and whole genome assemblies for several Gracilaria species. Genome Biology and Evolution 17 (7), evad124 (2023)

Krasovec, M.; Hoshino, M.; Zheng, M.; Lipinska, A.; Coelho, S.: Low spontaneous mutation rate in complex multicellular eukaryotes with a haploid-diploid life cycle. Molecular Biology and Evolution 40 (6), msad105 (2023)

Hatchett, W.; Jueterbock, A.; Kopp, M.; Coyer, J.; Coelho, S.; Hoarau, G.; Lipinska, A.: Evolutionary dynamics of sex-biased gene expression in a young XY system: Insights from the brown alga genus Fucus. New Phytologist 238 (1), pp. 422 - 437 (2023)

Manat, G.; Fanuel, M.; Jouanneau, D.; Jam, M.; Mac-Bear, J.; Rogniaux, H.; Mora, T.; Larocque, R.; Lipinska, A.; Czjzek, M. et al.; Ropartz, D.; Ficko-Blean, E.: Specificity of a β-porphyranase produced by the carrageenophyte red alga Chondrus crispus and implications of this unexpected activity on red algal biology. Journal of Biological Chemistry 298 (12), 102707 (2022)

Cossard, G.; Godfroy, O.; Nehr, Z.; Cruaud, C.; Cock, J.; Lipinska, A.; Coelho, S.: Selection drives the evolution of convergent gene expression changes during transitions to co-sexuality in haploid sexual systems. Nature Ecology & Evolution 6 (5), pp. 579 - 589 (2022)

Gueno, J.; Borg, M.; Bourdareau, S.; Cossard, G.; Godfroy, O.; Lipinska, A.; Tirichine, T.; Cock, J.; Coelho, S.: Chromatin landscape associated with sexual differentiation in a UV sex determination system. Nucleic Acids Research 50 (6), gkac145, pp. 3307 - 3322 (2022)

Müller, D.; Gaschet, E.; Godfroy, O.; Gueno, J.; Cossard, G.; Kunert, M.; Peters, A.; Westermeier, R.; Boland, W.; Cock, J. et al.; Lipinska, A.; Coelho, S.: A partially sex-reversed giant kelp sheds light into the mechanisms of sexual differentiation in a UV sexual system. New Phytologist 232 (1), pp. 252 - 263 (2021)

Mignerot, L.; Avia, K.; Luthringer, R.; Lipinska, A.; Peters, A.; Cock, J.; Coelho, S.: A key role for sex chromosomes in the regulation of parthenogenesis in the brown alga Ectocarpus. PLoS Genetics 15 (6), e1008211 (2019)

Lipinska, A.; Serrano-Serrano, M.; Cormier, A.; Peters, A.; Kogame, K.; Cock, J.; Coelho, S.: Rapid turnover of life-cycle-related genes in the brown algae. Genome Biology 20 (1), 35 (2019)

Lipinska, A.; Serrano-Serrano, M.; Cormier, A.; Peters, A.; Kogame, K.; Cock, J.; Coelho, S.: Correction to: Rapid turnover of life-cycle-related genes in the brown algae. Genome Biology 20 (1), 44 (2019)

Arun, A.; Coelho, S.; Peters, A.; Bourdareau, S.; Pérès, L.; Scornet, D.; Strittmatter, M.; Lipinska, A.; Avia, K.; Macaisne, N. et al.; Troadec, C.; Bendahmane, A.; Cock, J.: Convergent recruitment of TALE homeodomain life cycle regulators to direct sporophyte development in land plants and brown algae. eLife 8, e43101 (2019)

Coelho, S.; Gueno, J.; Lipinska, A.; Cock, J.; Umen, J.: UV Chromosomes and Haploid Sexual Systems. Trends in Plant Science 23 (9), pp. 794 - 807 (2018)

Avia, K.; Lipinska, A.; Mignerot, L.; Montecinos, A.; Jamy, M.; Ahmed, S.; Valero, M.; Peters, A.; Cock, J.; Roze, D. et al.; Coelho, S.: Genetic Diversity in the UV Sex Chromosomes of the Brown Alga Ectocarpus. Genes 9 (6), 286 (2018)

Godfroy, O.; Uji, T.; Nagasato, C.; Lipinska, A.; Scornet, D.; Peters, A.; Avia, K.; Colin, S.; Mignerot, L.; Motomura, T. et al.; Cock, J.; Coelho, S.: DISTAG/TBCCd1 Is Required for Basal Cell Fate Determination in Ectocarpus. Plant Cell 29 (12), pp. 3102 - 3122 (2017)

Lipinska, A.; Toda, N.; Heesch, S.; Peters, A.; Cock, J.; Coelho, S.: Multiple gene movements into and out of haploid sex chromosomes. Genome Biology 18, 104 (2017)