Publications of SM Coelho

Liesner, D.; Cossard, G.; Zheng, M.; Godfroy, O.; Barrera Redondo, J.; Haas, F.; Coelho, S.: Developmental pathways underlying sexual differentiation in the U/V sex chromosome system of giant kelp. Developmental Cell Epub ahead (2025)

Denoeud, F.; Godfroy, O.; Cruaud, C.; Heesch, S.; Nehr, Z.; Tadrent, N.; Couloux, A.; Brillet-Guéguen, L.; Delage, L.; Mckeown, D. et al.; Motomura, T.; Sussfeld, D.; Fan, X.; Mazéas, L.; Terrapon, N.; Barrera-Redondo, J.; Petroll, R.; Reynes, L.; Choi, S.-W.; Jo, J.; Uthanumallian, K.; Bogaert, K.; Duc, C.; Ratchinski, P.; Lipinska, A.; Noel, B.; Murphy, E.; Lohr, M.; Khatei, A.; Hamon-Giraud, P.; Vieira, C.; Avia, K.; Akerfors, S.; Akita, S.; Badis, Y.; Barbeyron, T.; Belcour, A.; Berrabah, W.; Blanquart, S.; Bouguerba-Collin, A.; Bringloe, T.; Cattolico, R.; Cormier, A.; Cruz de Carvalho, H.; Dallet, R.; De Clerck, O.; Debit, A.; Denis, E.; Destombe, C.; Dinatale, E.; Dittami, S.; Drula, E.; Faugeron, S.; Got, J.; Graf, L.; Groisillier, A.; Guillemin, M.-L.; Harms, L.; Hatchett, W.; Henrissat, B.; Hoarau, G.; Jollivet, C.; Jueterbock, A.; Kayal, E.; Knoll, A.; Kogame, K.; Le Bars, A.; Leblanc, C.; Le Gall, L.; Ley, R.; Liu, X.; LoDuca, S.; Lopez, P.; Lopez, P.; Manirakiza, E.; Massau, K.; Mauger, S.; Mest, L.; Michel, G.; Monteiro, C.; Nagasato, C.; Nègre, D.; Pelletier, E.; Phillips, N.; Potin, P.; Rensing, S.; Rousselot, E.; Rousvoal, S.; Schroeder, D.; Scornet, D.; Siegel, A.; Tirichine, L.; Tonon, T.; Valentin, K.; Verbruggen, H.; Weinberger, F.; Wheeler, G.; Kawai, H.; Peters, A.; Yoon, H.; Hervé, C.; Ye, N.; Bapteste, E.; Valero, M.; Markov, G.; Corre, E.; Coelho, S.; Wincker, P.; Aury, J.-M.; Cock, J.: Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems. Cell 187 (24), pp. 6943 - 6965 (2024)

Liu, P.; Vigneau, J.; Craig, R.; Barrera-Redondo, J.; Avdievich, E.; Martinho, C.; Borg, M.; Haas, F.; Liu, C.; Coelho, S.: 3D chromatin maps of a brown alga reveal U/V sex chromosome spatial organization. Nature Communications 15 (1), 9590 (2024)

Lotharukpong, J.; Zheng, M.; Luthringer, R.; Liesner, D.; Drost, H.-G.; Coelho, S.: A Transcriptomic Hourglass In Brown Algae. Nature 635 (8037), pp. 129 - 135 (2024)

Richards, T.; Eme, L.; Archibald, J.; Coelho, S.; de Mendoza, A.; Dessimoz, C.; Dolezal, P.; Fritz-Laylin, L.; Gabaldón, T.; Hampl, V. et al.; Kops, G.; Leger, M.; Lopez-Garcia, P.; McInerney, J.; Moreira, D.; Muñoz-Gómez, S.; Richter, D.; Ruiz-Trillo, I.; Santoro, A.; Sebé-Pedrós, A.; Snel, B.; Stairs , C.; Tromer, E.; van Hooff, J.; Wickstead, B.; Williams, T.; Rogers, A.; Dacks, J.; Wideman, J.: Reconstructing the last common ancestor of all eukaryotes. PLOS Biology 22 (11), e3002917 (2024)

Batista, R.; Wang, L.; Bogaert, K.; Coelho, S.: Insights into the molecular bases of multicellular development from brown algae. Development 151 (20), dev.203004 (2024)

Hoshino, M.; Cossard, G.; Haas, F.; Kane, E.; Kogame, K.; Jomori, T.; Wakimoto, T.; Glemin, S.; Coelho, S.: Parallel loss of sexual reproduction in field populations of a brown alga sheds light on the mechanisms underlying the emergence of asexuality. Nature Ecology & Evolution 8 (10), pp. 1916 - 1932 (2024)

Vigneau, J.; Martinho, C.; Godfroy, O.; Zheng, M.; Haas, F.; Borg, M.; Coelho, S.: Interactions between U and V sex chromosomes during the life cycle of Ectocarpus. Development 151 (20), dev202677 (2024)

Dries, E.; Meyers, Y.; Liesner, D.; Gonzaga, F.; Becker, J.; Zakka, E.; Coelho, S.; De Clerck, O.; Bogaert, K.: Cell wall-mediated maternal control of apical-basal patterning of the kelp Undaria pinnatifida. New Phytologist 243 (5), pp. 1887 - 1898 (2024)

Uthanumallian, K.; Del Cortona, A.; Coelho, S.; De Clerck, O.; Duchene, S.; Verbruggen, H.: Genome-wide patterns of selection-drift variation strongly associate with organismal traits across the green plant lineage. Genome Research 34 (8), pp. 1130 - 1139 (2024)

Coelho, S.: The brown seaweed Ectocarpus. Nature Methods 21 (3), pp. 363 - 364 (2024)

Luthringer, R.; Raphalen, M.; Guerra, C.; Colin, S.; Martinho, C.; Zheng, M.; Hoshino, M.; Badis, Y.; Lipinska, A.; Haas, F. et al.; Barrera-Redondo, J.; Alva, V.; Coelho, S.: Repeated co-option of HMG-box genes for sex determination in brown algae and animals. Science 283 (6689), eadk5466 (2024)

Borg, M.; Krueger-Hadfield, S.; Destombe, C.; Collén, J.; Lipinska, A.; Coelho, S.: Red macroalgae in the genomic era. New Phytologist 240 (2), pp. 471 - 488 (2023)

Lipinska, A.; Krueger-Hadfield, S.; Godfroy, O.; Dittami, S.; Ayres-Ostrock, L.; Bonthond, E.; Brillet-Guéguen, L.; Coelho, S.; Corre, E.; Cossard, G. et al.; Destombe, C.; Epperlein, P.; Faugeron, S.; Ficko-Blean, E.; Beltrán, J.; Lavaut, E.; Le Bars, A.; Marchi, F.; Mauger, S.; Michel, G.; Potin, P.; Scornet, D.; Sotka, E.; Weinberger, F.; Cabral de Oliveira, M.; Guillemin, M.-L.; Plastino, E.; Valero, M.: The Rhodoexplorer platform for red algal genomics and whole genome assemblies for several Gracilaria species. Genome Biology and Evolution 17 (7), evad124 (2023)

Krasovec, M.; Hoshino, M.; Zheng, M.; Lipinska, A.; Coelho, S.: Low spontaneous mutation rate in complex multicellular eukaryotes with a haploid-diploid life cycle. Molecular Biology and Evolution 40 (6), msad105 (2023)

Hatchett, W.; Jueterbock, A.; Kopp, M.; Coyer, J.; Coelho, S.; Hoarau, G.; Lipinska, A.: Evolutionary dynamics of sex-biased gene expression in a young XY system: Insights from the brown alga genus Fucus. New Phytologist 238 (1), pp. 422 - 437 (2023)

Barrera-Redondo, J.; Lotharukpong, J.; Drost, H.-G.; Coelho, S.: Uncovering gene-family founder events during major evolutionary transitions in animals, plants and fungi using GenEra. Genome Biology 24 (1), 54 (2023)

Godfroy, O.; Zheng, M.; Hao, H.; Henschen, A.; Peters, A.; Scornet, D.; Colin, S.; Ronchi, P.; Hipp, K.; Nagasato, C. et al.; Motomura, T.; Cock, J.; Coelho, S.: The baseless mutant links protein phosphatase 2A with basal cell identity in the brown alga Ectocarpus. Development 150 (4), dev201283 (2023)

Bogaert, K.; Zakka, E.; Coelho, S.; De Clerck, O.: Polarization of brown algal zygotes. Seminars in Cell & Developmental Biology 134, pp. 90 - 102 (2023)

Coelho, S.; De Clerck, O.: Embracing algal models. Seminars in Cell & Developmental Biology 134, pp. 1 - 3 (2023)