Publications
_{Protein Evolution}

Piselli, C.: How to isolate channel-forming membrane proteins using the E. coli expression system. Nature Protocols 20 (2), pp. 462 - 479 (2025)

Waldherr, A.; Fogtman, A.: Radiation symptoms resemble laminopathies and the physical underlying cause may sit at the lamin A C-terminus. Molecular Medicine 31 (1), 69 (2025)

Bodin, S.; Elhabashy, H.; Macdonald, E.; Winter, D.; Gauthier-Rouvière, C.: Flotillins in membrane trafficking and physiopathology. Biology of the Cell 117 (1), e202400134 (2025)

Coban, A.; Bornberg-Bauer, E.; Kemena, C.: Tracing the paths of modular evolution by quantifying rearrangement events of protein domains. BMC Ecology and Evolution 25 (1), 6 (2025)

Jiang, R.; Nilam, M.; Piselli, C.; Winterhalter, M.; Guo, D.-S.; Yu, S.; Hennig, A.; Nau, W.: Vesicle-Encapsulated Chemosensing Ensembles Allow Monitoring of Transmembrane Uptake Coupled with Enzymatic Reactions. Angewandte Chemie International Edition Epub ahead, e202425157 (2025)

Khuzhakhmetova, L.; Ananeva, A.; Gantin, G.; Dar’in, D.; Bunev, A.; Ebeling, S.; Herrmann, A.; Hartmann, M.; Kalinin, S.; Bakulina, O.: Synthesis of α-(azidomethyl)glutarimide and its applicationin construction of potential Cereblon ligands via the CuAAC reaction. Mendeleev Communications 35 (1), pp. 69 - 72 (2025)

Madaj, R.; Martinez-Goikoetxea, M.; Kaminski, K.; Ludwiczak, J.; Dunin-Horkawicz, S.: Applicability of AlphaFold2 in the modeling of dimeric, trimeric, and tetrameric coiled-coil domains. Protein Science 34 (1), e5244 (2025)

Martinez-Goikoetxea, M.: CCfrag: Scanning folding potential of coiled-coil fragments with AlphaFold. Bioinformatics Advances 54 (1), vbae195 (2025)

Murray, D.; Jahnel, M.; Lauer, J.; Avellaneda, M.; Brouilly, N.; Cezanne, A.; Morales-Navarrete, H.; Perini, E.; Ferguson, C.; Lupas, A. et al.; Kalaidzidis, Y.; Parton, R.; Grill, S.; Zerial, M.: Author Correction: An endosomal tether undergoes an entropic collapse to bring vesicles together. Nature 637 (8048), p. E29 (2025)

Borbaran Bravo, N.; Deordieva, E.; Doll, L.; ElGamacy, M.; Dannenmann, B.; Azevedo, J.; Iannuzzo, A.; Delafontaine, S.; Lehnerz, M.; Kolodziej, M. et al.; Hernandez-Alvarez, B.; Hellmuth, A.-S.; Findik, B.; Zakharova, V.; Bräuning, S.; Kandabarau, S.; Lengerke, C.; Feil, R.; Meytz, I.; Delon, J.; Templin, M.; Sturm, M.; Rieß, O.; Zeidler, C.; Welte, K.; Shcherbina, A.; Klimiankou, M.; Skokowa, J.: A New Severe Congenital Neutropenia Syndrome Associated with Autosomal Recessive COPZ1 Mutations. Blood Epub ahead (2024)

Braun, V.: Substrate Uptake by TonB-Dependent Outer Membrane Transporters. Molecular Microbiology 122 (6), pp. 929 - 947 (2024)

Klett, T.; Stahlecker, J.; Jaag, S.; Masberg, B.; Knappe, C.; Lämmerhofer, M.; Coles, M.; Stehle, T.; Boeckler, F.: Covalent Fragments Acting as Tyrosine Mimics for Mutant p53-Y220C Rescue by Nucleophilic Aromatic Substitution. ACS Pharmacology & Translational Science 7 (12), pp. 3984 - 3999 (2024)

Landau, M.; Elsabbagh, S.; Gross, H.; Fuchs, A.; Schultz, A.; Schultz, J.: The membrane domains of mammalian adenylyl cyclases are lipid receptors. eLife 13, RP101483 (2024)

Curtis, Z.; Escudeiro, P.; Mallon, J.; Leland, O.; Rados , T.; Dodge, A.; Andre, K.; Kwak, J.; Yun, K.; Issac, B. et al.; Martinez Pastor, M.; Schmid, A.; Pohlschroder, M.; Alva, V.; Bisson, A.: Halofilins as Emerging Bactofilin Families of Archaeal Cell Shape Plasticity Orchestrators. Proceedings of the National Academy of Sciences of the United States of America 121 (40), e2401583121 (2024)

Fruet, C.; Martinez-Goikoetxea, M.; Merino, F.; Lupas, A.: A computational model for lipid-anchored polysaccharide export by the outer-membrane protein GfcD. Biophysical Journal 123 (20), pp. 3491 - 3499 (2024)

Ullrich, T.; Klimenkova, O.; Pollmann, C.; Lasram, A.; Hatskovska, V.; Maksymenko, K.; Milijaš-Jotić, M.; Schenk, L.; Lengerke, C.; Hartmann, M. et al.; Piehler, J.; Skokowa, J.; ElGamacy, M.: A Strategy to Design Protein-based Antagonists Against Type I Cytokine Receptors. PLOS Biology (accepted)

Schwab, S.; Hu, Y.; van Erp, B.; Kajili, M.; Hartmann, M.; Hernandez-Alvarez, B.; Alva, V.; Boyle, A.; Dame, R.: Novel histones and histone variant families in prokaryotes. Nature Communications 15 (1), 7950 (2024)

Hu, Y.; Schwab, S.; Deiss, S.; Escudeiro, P.; van Heesch, T.; Joiner, J.; Vreede, J.; Hartmann, M.; Lupas, A.; Hernandez Alvarez, B. et al.; Alva, V.; Dame, R.: Bacterial histone HBb from Bdellovibrio bacteriovorus compacts DNA by bending. Nucleic Acids Research 52 (14), gkae485, pp. 8193 - 8204 (2024)

Fuchs, A.: Detection and quantification of C-terminally tagged proteins by in-gel fluorescence. Scientific Reports 14 (1), 15697 (2024)

Grin, I.; Maksymenko, K.; Wörtwein, T.; ElGamacy, M.: The Damietta Server: a comprehensive protein design toolkit. Nucleic Acids Research 52 (W1), gkae297, pp. W200 - W206 (2024)