Journal Article (472)

21.
Journal Article
Fruet, C.; Martinez-Goikoetxea, M.; Merino, F.; Lupas, A.: A computational model for lipid-anchored polysaccharide export by the outer-membrane protein GfcD. Biophysical Journal 123 (20), pp. 3491 - 3499 (2024)
22.
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Ullrich, T.; Klimenkova, O.; Pollmann, C.; Lasram, A.; Hatskovska, V.; Maksymenko, K.; Milijaš-Jotić, M.; Schenk, L.; Lengerke, C.; Hartmann, M. et al.; Piehler, J.; Skokowa, J.; ElGamacy, M.: A Strategy to Design Protein-based Antagonists Against Type I Cytokine Receptors. PLOS Biology (accepted)
23.
Journal Article
Schwab, S.; Hu, Y.; van Erp, B.; Kajili, M.; Hartmann, M.; Hernandez-Alvarez, B.; Alva, V.; Boyle, A.; Dame, R.: Histones and histone variant families in prokaryotes. Nature Communications 15 (1), 7950 (2024)
24.
Journal Article
Hu, Y.; Schwab, S.; Deiss, S.; Escudeiro, P.; van Heesch, T.; Joiner, J.; Vreede, J.; Hartmann, M.; Lupas, A.; Hernandez Alvarez, B. et al.; Alva, V.; Dame, R.: Bacterial histone HBb from Bdellovibrio bacteriovorus compacts DNA by bending. Nucleic Acids Research 52 (14), gkae485, pp. 8193 - 8204 (2024)
25.
Journal Article
Tomecki, R.; Drazkowska, K.; Madaj, R.; Mamot, A.; Dunin-Horkawicz, S.; Sikorski, P.: Expanding the available RNA labeling toolbox with CutA nucleotidyltransferase for efficient transcript labeling with purine and pyrimidine nucleotide analogs. ChemBioChem 25 (15), e202400202 (2024)
26.
Journal Article
Fuchs, A.: Detection and quantification of C-terminally tagged proteins by in-gel fluorescence. Scientific Reports 14 (1), 15697 (2024)
27.
Journal Article
Grin, I.; Maksymenko, K.; Wörtwein, T.; ElGamacy, M.: The Damietta Server: a comprehensive protein design toolkit. Nucleic Acids Research 52 (W1), gkae297, pp. W200 - W206 (2024)
28.
Journal Article
Iyengar, B.; Grandchamp, A.; Bornberg-Bauer, E.: How antisense transcripts can evolve to encode novel proteins. Nature Communications 15 (1), 6187 (2024)
29.
Journal Article
Lebherz, K.; Iyengar, B.; Bornberg-Bauer, E.: Modeling Length Changes in De Novo Open Reading Frames during Neutral Evolution. Genome Biology and Evolution 16 (7), evae129 (2024)
30.
Journal Article
Lebherz, M.; Fouks, B.; Schmidt, J.; Bornberg-Bauer, E.; Grandchamp, A.: DNA Transposons Favor De Novo Transcript Emergence Through Enrichment of Transcription Factor Binding Motifs. Genome Biology and Evolution 16 (7), evae134 (2024)
31.
Journal Article
Hertle, E.; Ursinus, A.; Martin, J.: Low-temperature features of the psychrophilic chaperonin from Pseudoalteromonas haloplanktis. Archives of Microbiology 206 (7), 299 (2024)
32.
Journal Article
Makova, K.; Pickett, B.; Harris, G.; Hartley, R.; Cechova, M.; Pal, K.; Nurk, S.; Yoo, D.; Li, Q.; Hebbar, P. et al.; McGrath, B.; Antonacci, F.; Aubel, M.; Biddanda, A.; Borchers, M.; Bornberg-Bauer, E.; Bouffard, G.; Brooks, S.; Carbone, L.; Carrel, L.; Carroll, A.; Chang, P.-C.; Chin, C.-S.; Cook, D.; Craig, S.; de Gennaro, L.; Diekhans, M.; Dutra, A.; Garcia, P.; Grady, P.; Green, R.; Haddad, D.; Hallast, P.; Harvey, W.; Hickey, G.; Hillis, D.; Hoyt , S.; Jeong, H.; Kamali, K.; Kosakovsky Pond, S.; LaPolice, T.; Lee, C.; Lewis, A.; Loh, Y.-H.; Masterson, P.; McGarvey, K.; McCoy, R.; Medvedev, P.; Miga, K.; Munson , K.; Pak, E.; Paten, B.; Pinto, B.; Potapova, T.; Rhie, A.; Rocha, J.; Ryabov, F.; Ryder, O.; Sacco, S.; Shafin, K.; Shepelev, V.; Slon, V.; Solar, S.; Storer, J.; Sudmant, P.; Sweetalana; Sweeten, A.; Tassia, M.; Thibaud-Nissen, F.; Ventura, M.; Wilson, M.; Young, A.; Zeng, A.; Zhang, X.; Szpiech, Z.; Huber, C.; Gerton, J.; Yi, S.; Schatz, M.; Alexandrov, I.; Koren, S.; O'Neill, R.; Eichler, E.; Phillippy, A.: The complete sequence and comparative analysis of ape sex chromosomes. Nature 630 (8016), pp. 401 - 411 (2024)
33.
Journal Article
Selim, K.; Alva, V.: PII-like signaling proteins: a new paradigm in orchestrating cellular homeostasis. Current Opinion in Microbiology 79, 102453 (2024)
34.
Journal Article
von Kügelgen , A.; Cassidy, C.; van Dorst, S.; Pagani, L.; Batters, C.; Ford, Z.; Löwe, J.; Alva, V.; Stansfeld, P.; Bharat, T.: Membraneless channels sieve cations in ammonia-oxidizing marine archaea. Nature 630 (8015), pp. 230 - 236 (2024)
35.
Journal Article
Aubel, M.; Buchel, F.; Heames, B.; Jones, A.; Honc, O.; Bornberg-Bauer, E.; Hlouchova, K.: High-throughput selection of human de novo-emerged sORFs with high folding potential. Genome Biology and Evolution 16 (4), evae069 (2024)
36.
Journal Article
Mantovani, O.; Haffner, M.; Walke, P.; Elshereef, A.; Wagner, B.; Petras, D.; Forchhammer, K.; Selim, K.; Hagemann, M.: The redox-sensitive R-loop of the carbon control protein SbtB contributes to the regulation of the cyanobacterial CCM. Scientific Reports 14 (1), 7885 (2024)
37.
Journal Article
Röhl, A.; Netz, E.; Kohlbacher, O.; Elhabashy, H.: CLAUDIO: Automated structural analysis of cross-linking data. Bioinformatics 40 (4), btae146 (2024)
38.
Journal Article
Shevalev, O.; Bischof, L.; Sapegin, A.; Bunev, A.; Grigoreva, O.; Kantin , G.; Kalinin, S.; Hartmann, M.: Discovery and characterization of potent spiro-isoxazole-based cereblon ligands with a novel binding mode. European Journal of Medicinal Chemistry 270, 116328 (2024)
39.
Journal Article
Luthringer, R.; Raphalen, M.; Guerra, C.; Colin, S.; Martinho, C.; Zheng, M.; Hoshino, M.; Badis, Y.; Lipinska, A.; Haas, F. et al.; Barrera-Redondo, J.; Alva, V.; Coelho, S.: Repeated co-option of HMG-box genes for sex determination in brown algae and animals. Science 283 (6689), eadk5466 (2024)
40.
Journal Article
Baldwin, E.; van Eeuwen, T.; Hoyos, D.; Zalevsky, A.; Tchesnokov, E.; Sánchez, R.; Miller, B.; Di Stefano, L.; Ruiz, F.; Hancock, M. et al.; Işik, E.; Mendez-Dorantes, C.; Walpole, T.; Nichols, C.; Wan, P.; Riento, K.; Halls-Kass, R.; Augustin, M.; Lammens, A.; Jestel, A.; Upla, P.; Xibinaku, K.; Congreve, S.; Hennink, M.; Rogala, K.; Schneider, A.; Fairman, J.; Christensen, S.; Desrosiers, B.; Bisacchi, G.; Saunders, O.; Hafeez, N.; Miao, W.; Kapeller, R.; Zaller, D.; Sali, A.; Weichenrieder, O.; Burns, K.; Götte, M.; Rout, M.; Arnold, E.; Greenbaum, B.; Romero, D.; LaCava, J.; Taylor, M.: Structures, functions, and adaptations of the human LINE-1 ORF2 protein. Nature 626 (7997), pp. 194 - 206 (2024)
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