Publications
_{Protein Evolution}

Mechelke, M.; Habeck, M.: Estimation of Interaction Potentials through the Configurational Temperature Formalism. Journal of Chemical Theory and Computation 9 (12), pp. 5685 - 5692 (2013)

Kalev, I.; Habeck, M.: Confidence-guided local structure prediction with HHfrag. PLoS One 8 (10), e76512 (2013)

Kopec, K.; Lupas, A.: β-Propeller blades as ancestral peptides in protein evolution. PLoS One 8 (10), e77074 (2013)

Braun, V.; Patzer, S.: Intercellular communication by related bacterial protein toxins: colicins, contact-dependent inhibitors, and proteins exported by the type VI secretion system. FEMS Microbiology Letters 345 (1), pp. 13 - 21 (2013)

Ali, M.; Plattner, S.; Radakovic, Z.; Wieczorek, K.; Elashry, A.; Grundler, F.; Ammelburg, M.; Siddique, S.; Bohlmann, H.: An Arabidopsis ATPase gene involved in nematode-induced syncytium development and abiotic stress responses. The Plant Journal 74 (5), pp. 852 - 866 (2013)

Mechelke, M.; Habeck, M.: A probabilistic model for secondary structure prediction from protein chemical shifts. Proteins: Structure, Function, and Bioinformatics 81 (6), pp. 984 - 993 (2013)

Anger, A.; Armache, J.-P.; Berninghausen, O.; Habeck, M.; Subklewe, M.; Wilson, D.; Beckmann, R.: Structures of the human and Drosophila 80S ribosome. Nature 497 (7447), pp. 80 - 85 (2013)

Zaparty, M.; Hagemann, A.; Bräsen, C.; Hensel, R.; Lupas, A.; Brinkmann, H.; Siebers, B.: The first prokaryotic trehalose synthase complex identified in the hyperthermophilic crenarchaeon Thermoproteus tenax. PLoS One 8 (4), e61354 (2013)

Song, C.; Weichbrodt, C.; Salnikov, E.; Dynowski, M.; Forsberg, B.; Bechinger, B.; Steinem, C.; de Groot, B.; Zachariae, U.; Zeth, K.: Crystal structure and functional mechanism of a human antimicrobial membrane channel. Proceedings of the National Academy of Sciences of the United States of America 110 (12), pp. 4586 - 4591 (2013)

Braun, V.; Patzer, S.: Bakterielle Proteintoxine: Waffen gegen Konkurrenten. Biospektrum 19 (1), pp. 22 - 24 (2013)

Chellamuthu, V.; Alva, V.; Forchhammer, K.: From cyanobacteria to plants: conservation of PII functions during plastid evolution. Planta 237 (2), pp. 451 - 462 (2013)

Clarke, M.; Lohan, A.; Liu, B.; Lagkouvardos, I.; Roy, S.; Zafar, N.; Bertelli, C.; Schilde, C.; Kianianmomeni, A.; Bürglin, T. et al.; Frech, C.; Turcotte, B.; Kopec, K.; Synnott, J.; Choo, C.; Paponov, I.; Frech, C.; Finkler, A.; Tan, C.; Hutchins, A.; Weinmeier, T.; Rattei, T.; Chu, J.; Gimenez, G.; Irimia, M.; Rigden, D.; Fitzpatrick, D.; Lorenzo-Morales, J.; Bateman, A.; Chiu, C.-H.; Tang, P.; Hegemann, P.; Fromm, H.; Raoult, D.; Greub, G.; Miranda-Saavedra, D.; Chen, N.; Nash, P.; Ginger, M.; Horn, M.; Schaap, P.; Caler, L.; Loftus, B.: Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling. Genome Biology: Biology for the Post-Genomic Era 14 (2), R11 (2013)

Zeth, K.; Kozjak-Pavlov, V.; Faulstich, M.; Fraunholz, M.; Hurwitz, R.; Kepp, O.; Rudel, T.: Structure and function of the PorB porin from disseminating Neisseria gonorrhoeae. Biochemical Journal 449 (3), pp. 631 - 642 (2013)

Chakraborty, P.; Braun, V.; Hantke, K.; Cornelis, P. (Eds.): Iron Uptake in Bacteria with Emphasis on E. coli and Pseudomonas. (2013), 89 pp.

Braun, V.; Hantke, K.: The Tricky Ways Bacteria Cope with Iron Limitation. In: Iron Uptake in Bacteria with Emphasis on E. coli and Pseudomonas, pp. 31 - 66 (Eds. Chakraborty, R.; Braun, V.; Hantke, K.; Cornelis, P.). Springer, Dordrecht, The Netherlands (2013)

Farías-Rico, J.; Höcker, B.: Design of chimeric proteins by combination of subdomain-sized fragments. In: Methods in Enzymology, Vol. 523. Academic Press, New York, NY (2013)

Nostadt, R.; Hilbert, M.; Kleyer, H.; Martin, J.; Lupas, A.; Zuccaro, A.: The secreted Piriformospora indica effector Dld1 is involved in penetration of plant cell wall appositions. In XI International Fungal Biology Conference, p. 42. XI International Fungal Biology Conference, Karlsruhe, Germany, September 29, 2013 - October 03, 2013. (2013)

Forsberg, B.; Song, C.; Weichbrodt, C.; Dynowski, M.; Steinem, C.; Zachariae, U.; Zeth, K.; de Groot, B.: Channel crystal structure and antimicrobial mechanism of Dermcidin from human skin. In Biophysical Journal, 104 (2 Supplement 1), p. 241A. 57th Annual Meeting of the Biophysical Society, Philadelphia, PA, USA, February 02, 2013 - February 06, 2013. Cell Press, Cambridge, Mass. (2013)

Scheib, U.; Shanmugaratnam, S.; Farias-Rico, J.; Höcker, B.: Change in Protein-Ligand Specificity Through Binding Pocket Grafting. Molecular Life Sciences 2013: International Symposium of the German Society for Biochemistry and Molecular Biology (GBM) , Frankfurt a.M., Germany (2013)

Kretschmer, D.; Hanzelmann, D.; Nikola, N.; Rautenberg, M.; Linke, D.; Otto, M.; Peschel, A.: Influence of truncation of staphylococcal b-type phenol-soluble modulins on the activation of the human formyl-peptide receptors. 65. Jahrestagung der Deutschen Gesellschaft fur Hygiene und Mikrobiologie (DGHM 2013), Rostock, Germany (2013)