Publications
_{Protein Evolution}

Boudrioua, A.; Joiner, J.; Grin, I.; Kronenberger, T.; Korotkov, V.; Steinchen, W.; Kohler, A.; Schminke, S.; Schulte, J.-C.; Pietsch, M. et al.; Naini, A.; Kalverkamp, S.; Hotop, S.-K.; Coyle, T.; Piselli, C.; Coles, M.; Rox, K.; Marschal, M.; Bange, G.; Flieger, A.; Poso, A.; Brönstrup, M.; Hartmann, M.; Wagner, S.: Discovery of synthetic small molecules targeting the central regulator of Salmonella pathogenicity. Science Advances 11 (15), eadr5235 (2025)

Fuchs, A.: Enzymatic Protein Fusions with 100% Product Yield. eLife 13, RP102765 (2025)

Isbilir, B.; Yeates, A.; Alva, V.; Bharat, T.: Mapping the ultrastructural topology of the corynebacterial cell surface. PLOS Biology 23 (4), e3003130 (2025)

Kanhema, T.; Parobczak, K.; Patil, S.; Holm-Kaczmarek, D.; Hallin, E.; Ludwiczak, J.; Szczepankiewicz, A.; Pauzin, F.; Mahboob, A.; Szum, A. et al.; Ishizuka, Y.; Dunin-Horkawicz, S.; Kursula, P.; Wilczynski, G.; Magalska, A.; Bramham, C.: Arc/Arg3.1 binds the nuclear polyadenylate-binding protein RRM and regulates neuronal activity-dependent formation of nuclear speckles. Cell Reports 44 (4), 115525 (2025)

Rados, T.; Leland, O.; Escudeiro, P.; Mallon, J.; Andre, K.; Caspy, I.; von Kügelgen, A.; Stolovicki, E.; Nguyen, S.; Patop, I. et al.; Rangel, T.; Kadener, S.; Renner, L.; Thiel, V.; Soen, Y.; Bharat, T.; Alva, V.; Bisson, A.: Tissue-Like Multicellular Development Triggered by Mechanical Compression in Archaea. Science 388 (6742), pp. 109 - 115 (2025)

Ananevaa, A.; Kantin, G.; Dar’in, D.; Bunev, A.; Ebeling, S.; Herrmann, A.; Hartmann, M.; Kalinin, S.; Bakulina, O.: Catalytic Castagnoli–Cushman reaction-based synthesis of tetrahydroisoquinolone–glutarimide dyads and their evaluation as potential cereblon ligands. Mendeleev Communications 35 (3) (2025)

Jiang, R.; Nilam, M.; Piselli, C.; Winterhalter, M.; Guo, D.-S.; Yu, S.; Hennig, A.; Nau, W.: Vesicle-Encapsulated Chemosensing Ensembles Allow Monitoring of Transmembrane Uptake Coupled with Enzymatic Reactions. Angewandte Chemie International Edition 64 (13), e202425157 (2025)

Piselli, C.: How to isolate channel-forming membrane proteins using the E. coli expression system. Nature Protocols 20 (2), pp. 462 - 479 (2025)

Waldherr, A.; Fogtman, A.: Radiation symptoms resemble laminopathies and the physical underlying cause may sit at the lamin A C-terminus. Molecular Medicine 31 (1), 69 (2025)

Bodin, S.; Elhabashy, H.; Macdonald, E.; Winter, D.; Gauthier-Rouvière, C.: Flotillins in membrane trafficking and physiopathology. Biology of the Cell 117 (1), e202400134 (2025)

Coban, A.; Bornberg-Bauer, E.; Kemena, C.: Tracing the paths of modular evolution by quantifying rearrangement events of protein domains. BMC Ecology and Evolution 25 (1), 6 (2025)

Khuzhakhmetova, L.; Ananeva, A.; Gantin, G.; Dar’in, D.; Bunev, A.; Ebeling, S.; Herrmann, A.; Hartmann, M.; Kalinin, S.; Bakulina, O.: Synthesis of α-(azidomethyl)glutarimide and its applicationin construction of potential Cereblon ligands via the CuAAC reaction. Mendeleev Communications 35 (1), pp. 69 - 72 (2025)

Madaj, R.; Martinez-Goikoetxea, M.; Kaminski, K.; Ludwiczak, J.; Dunin-Horkawicz, S.: Applicability of AlphaFold2 in the modeling of dimeric, trimeric, and tetrameric coiled-coil domains. Protein Science 34 (1), e5244 (2025)

Martinez-Goikoetxea, M.: CCfrag: Scanning folding potential of coiled-coil fragments with AlphaFold. Bioinformatics Advances 54 (1), vbae195 (2025)

Murray, D.; Jahnel, M.; Lauer, J.; Avellaneda, M.; Brouilly, N.; Cezanne, A.; Morales-Navarrete, H.; Perini, E.; Ferguson, C.; Lupas, A. et al.; Kalaidzidis, Y.; Parton, R.; Grill, S.; Zerial, M.: Author Correction: An endosomal tether undergoes an entropic collapse to bring vesicles together. Nature 637 (8048), p. E29 (2025)

Coban, A.; Bornberg-Bauer, E.; Kemena-Rinke, C.: DomRates-Seq: Tracing the Paths of Modular Evolution. In Münster Evolution Meeting 2025, p. 57. Münster Evolution Meeting (MEM 2025), Münster, Germany, March 17, 2025 - March 20, 2025. (2025)

Eicholt, L.; Bornberg-Bauer, E.: Mapping the Uncharted Sequence Space: A k-mer Powered, Alignment-Free Journey through Protein Sequence Space. In Münster Evolution Meeting 2025, p. 33. Münster Evolution Meeting (MEM 2025), Münster, Germany, March 17, 2025 - March 20, 2025. (2025)

Lebherz, M.; Glaser-Schmitt, A.; Grandchamp, A.; Parsch, J.; Bornberg-Bauer, E.: Investigating de novo gene emergence in six Drosophila species. In Münster Evolution Meeting 2025, p. 69. Münster Evolution Meeting (MEM 2025), Münster, Germany, March 17, 2025 - March 20, 2025. (2025)

Lucas, S.; Lebherz, M.; Bornberg-Bauer, E.: De-novo gene retention. In Münster Evolution Meeting 2025, p. 72. Münster Evolution Meeting (MEM 2025), Münster, Germany, March 17, 2025 - March 20, 2025. (2025)

Fuchs, A.: Specific protein fusions with Connectase. BioConnect Seminar: Max Planck Institute for Biology, Tübingen, Germany (2025)