Publications of A Kahles

Kahles, A.; Lehmann, K.-V.; Toussaint, N.; Hüser, M.; Sachsenberg, T.; Stegle, O.; Kohlbacher, O.; Sander, C.; Cancer Genome Atlas Research Network; Rätsch, G.: Comprehensive Analysis of Alternative Splicing Across Tumors from 8,705 Patients. Cancer Cell 34 (2), pp. 211 - 224 (2018)

Drewe, P.; Stegle, O.; Hartmann, L.; Kahles, A.; Bohnert, R.; Wachter, A.; Borgwardt, K.; Rätsch, G.: Accurate detection of differential RNA processing. Nucleic Acids Research 41 (10), pp. 5189 - 5198 (2013)

Smith, L.; Hartmann, L.; Drewe, P.; Bohnert, R.; Kahles, A.; Lanz, C.; Rätsch, G.: Multiple insert size paired-end sequencing for deconvolution of complex transcriptomes. RNA Biology 9 (5), pp. 596 - 609 (2012)

Gan, X.; Stegle, O.; Behr, J.; Steffen, J.; Drewe, P.; Hildebrand, K.; Lyngsoe , R.; Schultheiss, S.; Osborne, E.; Sreedharan, V. et al.; Kahles, A.; Bohnert, R.; Jean, G.; Derwent, P.; Kersey, P.; Belfield, E.; Harberd, N.; Kemen, F.; Toomajian, C.; Kover , P.; Clark, R.; Rätsch, G.; Mott, R.: Multiple reference genomes and transcriptomes for Arabidopsis thaliana. Nature 477 (7365), pp. 419 - 423 (2011)

Lehmann, K.; Kahles, A.; Toussaint, N.; Hüser, M.; Stark, S.; Sachsenberg, T.; Stegle, O.; Kohlbacher, O.; Sander, C.; Rätsch, G.: Comprehensive analysis of alternative splicing across tumors from 8,705 patients. In 68th Annual Meeting of the American Society of Human Genetics (ASHG 2018), 371, p. 186. 68th Annual Meeting of the American Society of Human Genetics (ASHG 2018), San Diego, CA, USA, October 16, 2018 - October 20, 2018. (2018)

Rätsch, G.; Gan, X.; Stegle, O.; Behr, J.; Drewe, P.; Drewe, P.; Steffen, J.; Clark, R.; Osborne, E.; Schultheiss, S. et al.; Sreedharan, V.; Kahles, A.; Bohnert, R.; Jean, G.; Hildebrand, K.; Toomajian, C.; Lyngsoe, R.; Derwent, P.; Kersey, P.; Belfield, E.; Harberd, N.; Kemen, E.; Kover, P.: Multiple reference genomes and transcriptomes for Arabidopsis thaliana. 20th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB 2012), Long Beach, CA, USA (2012)

Behr, J.; Bohnert, R.; Kahles, A.; Schweikert, G.; Zeller, G.; Hartmann, L.; Rätsch, G.: Accurate RNA-seq based de novo annotation using mGene.ngs. 19th Annual International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology (ISMB/ECCB 2011), Wien, Austria (2011)

Jean, G.; Raetsch, G.; Kahles, A.; Sonnenburg, S.; Schneeberger, K.; Hagmann, J.; De Bona, F.; Weigel, D.: Fast and Accurate RNA-Seq alignments with PALMapper. 19th Annual International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology (ISMB ECCB 2011), Wien, Austria (2011)

Rätsch, G.; Jean, G.; Kahles, A.; Sonnenburg, S.; De Bona, F.; Schneeberger, K.; Hagmann, J.; Weigel, D.: PALMapper: Fast and Accurate Spliced Alignments of Sequence Reads. 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB 2010), Boston, MA, USA (2010)