Publications of HA Burbano

Lang, P.; Erberich, J.; Lopez, L.; Weiß, C.; Amador, G.; Fung, H.; Latorre, S.; Lasky, J.; Burbano, H.; Expósito-Alonso, M. et al.; Bergmann, D.: Century-long timelines of herbarium genomes predict plant stomatal response to climate change. Nature Ecology & Evolution 8 (9), pp. 1641 - 1653 (2024)

Barragan, A.; Latorre, S.; Malmgren, A.; Harant, A.; Win, J.; Sugihara, Y.; Burbano, H.; Kamoun, S.; Langner, T.: Multiple horizontal mini-chromosome transfers drive genome evolution of clonal blast fungus lineages. Molecular Biology and Evolution 41 (8), msae164 (2024)

Backman, T.; Latorre, S.; Symeonidi, E.; Muszyński, A.; Bleak , E.; Eads, L.; Martinez-Koury, P.; Som, S.; Hawks, A.; Gloss, A. et al.; Belnap, D.; Manuel, A.; Deutschbauer, A.; Bergelson, J.; Azadi, P.; Burbano, H.; Karasov, T.: A phage tail-like bacteriocin suppresses competitors in metapopulations of pathogenic bacteria. Science 384 (6701), eado0713 (2024)

Latorre, S.; Were, V.; Foster, A.; Langner, T.; Malmgren, A.; Harant, A.; Asuke, S.; Reyes-Avila, S.; Gupta, D.; Jensen, C. et al.; Ma, W.; Mahmud, N.; Mehebub, S.; Mulenga, R.; Muzahid, A.; Paul, S.; Rabby, S.; Al Mahbub Rahat, A.; Ryder, L.; Shrestha, R.; Sichilima, S.; Soanes, D.; Singh, P.; Bentley, A.; Saunders, D.; Tosa, Y.; Croll, D.; Lamour, K.; Islam, T.; Tembo, B.; Win, J.; Talbot, N.; Burbano, H.; Kamoun, S.: Genomic surveillance uncovers a pandemic clonal lineage of the wheat blast fungus. PLoS Biology 21 (4), e3002052 (2023)

Arce, A.; Mencia, R.; Cambiagno, D.; Lang, P.; Liu, C.; Burbano, H.; Weigel, D.; Manavella, P.: Polymorphic Inverted Repeats near coding genes impact chromatin topology and phenotypic traits in Arabidopsis thaliana. Cell Reports 42 (1), 112029 (2023)

Kreiner, J.; Latorre, S.; Burbano, H.; Stinchcombe, J.; Otto, S.; Weigel, D.; Wright, S.: Rapid weed adaptation and range expansion in response to agriculture over the past two centuries. Science 378 (6624), pp. 1079 - 1085 (2022)

Shirsekar, G.; Devos, J.; Latorre, S.; Blaha, A.; Queiroz Dias, M.; González Hernando, A.; Lundberg, D.; Burbano, H.; Fenster, C.; Weigel, D.: Multiple Sources of Introduction of North American Arabidopsis thaliana from across Eurasia. Molecular Biology and Evolution 38 (12), pp. 5328 - 5344 (2021)

Langner, T.; Harant, A.; Gomez-Luciano, L.; Shrestha, R.; Malmgren, A.; Latorre, S.; Burbano, H.; Win, J.; Kamoun, S.: Genomic rearrangements generate hypervariable mini-chromosomes in host-specific isolates of the blast fungus. PLoS Genetics 17 (2), e1009386 (2021)

Latorre, S.; Lang, P.; Burbano, H.; Gutaker, R.: Isolation, Library Preparation, and Bioinformatic Analysis of Historical and Ancient Plant DNA. Current Protocols in Plant Biology 5 (4), e20121 (2020)

Lang, P.; Weiß, C.; Kersten, S.; Latorre, S.; Nagel, S.; Nickel, B.; Meyer, M.; Burbano, H.: Hybridization ddRAD-sequencing for population genomics of nonmodel plants using highly degraded historical specimen DNA. Molecular Ecology Resources 20 (5), pp. 1228 - 1247 (2020)

Latorre, S.; Reyes-Avila, C.; Malmgren, A.; Win, J.; Kamoun, S.; Burbano, H.: Differential loss of effector genes in three recently expanded pandemic clonal lineages of the rice blast fungus. BMC Biology 18, 88 (2020)

Weiß, C.; Gansauge, M.-T.; Aximu-Petri, A.; Meyer, M.; Burbano, H.: Mining ancient microbiomes using selective enrichment of damaged DNA molecules. BMC Genomics 21 (1), 432 (2020)

Exposito-Alonso, M.; Drost, H.-G.; Burbano, H.; Weigel, D.: The Earth BioGenome project: opportunities and challenges for plant genomics and conservation. The Plant Journal 102 (2), pp. 222 - 229 (2020)

Exposito-Alonso, M.; 500 Genomes Field Experiment Team; Burbano, H.; Bossdorf, O.; Nielsen, R.; Weigel, D.: Publisher Correction: Natural selection on the Arabidopsis thaliana genome in present and future climates. Nature 574 (7778), p. E16 (2019)

Exposito-Alonso, M.; 500 Genomes Field Experiment Team; Burbano, H.; Bossdorf, O.; Nielsen, R.; Weigel, D.: Natural selection on the Arabidopsis thaliana genome in present and future climates. Nature 573 (7772), pp. 126 - 129 (2019)

Gutaker, R.; Weiß, C.; Ellis, D.; Anglin, N.; Knapp, S.; Fernández-Alonso , J.; Prat, S.; Burbano, H.: The origins and adaptation of European potatoes reconstructed from historical genomes. Nature Ecology & Evolution 3 (7), pp. 1993 - 1101 (2019)

Lang, P.; Willems, F.; Scheepens, J.; Burbano, H.; Bossdorf, O.: Using herbaria to study global environmental change. New Phytologist 221 (1), pp. 110 - 122 (2019)

Weiß, C.; Pais, M.; Cano, L.; Kamoun, S.; Burbano, H.: nQuire: a statistical framework for ploidy estimation using next generation sequencing. BMC Bioinformatics 19, 122 (2018)

Exposito-Alonso, M.; Becker, C.; Schuenemann, V.; Reiter, E.; Setzer, C.; Slovak, R.; Brachi, B.; Hagmann, J.; Grimm, D.; Chen, J. et al.; Busch, W.; Bergelson, J.; Ness, R.; Krause, J.; Burbano, H.; Weigel, D.: The rate and potential relevance of new mutations in a colonizing plant lineage. PLoS Genetics 14 (2), e1007155 (2018)

Exposito-Alonso, M.; Vasseur, F.; Ding, W.; Wang, G.; Burbano, H.; Weigel, D.: Genomic basis and evolutionary potential for extreme drought adaptation in Arabidopsis thaliana. Nature Ecology & Evolution 2 (2), pp. 352 - 358 (2018)