Publications
_{Structural Bioinformatics}

Smug, B.; Szczepaniak, K.; Riocha, E.; Dunin-Horkawicz, S.; Mostowy, R.: Ongoing shuffling of protein fragments diversifies core viral functions linked to interactions with bacterial hosts. Nature Communications 14 (1), 7460 (2023)

Kaminski, K.; Ludwiczak, J.; Pawlicki, K.; Alva, V.; Dunin-Horkawicz, S.: pLM-BLAST: distant homology detection based on direct comparison of sequence representations from protein language models. Bioinformatics 39 (10), btad579 (2023)

Smug, B.; Szczepaniak, K.; Dunin-Horkawicz, S.; Rocha, E.; Mostowy, R.: How phages play with LEGO: studying protein-level mosaicism in phages and its evolutionary implications. In The Local Pangenome, 40, p. 88. The Local Pangenome, Alicante, Spain, October 25, 2023 - October 28, 2023. (2023)

Madaj, R.; Orlowska, M.; Kaminski, K.; Pawlicki, K.; Dunin-Horkawicz, S.: Side mutants of connexin proteins as a cause of non-functional gap junction beta channels: a structural bioinformatics approach. In BioInformatics in Torun 2023 - BIT23, p. 16. BioInformatics in Torun 2023 (BIT23), Torun, Poland, June 29, 2023. (2023)

Orlowska, M.; Madaj, R.; Kubica, J.; Kaminski, K.; Dunin-Horkawicz, S.: Bioinformatics approach for programmed cell death receptor from Nostoc punctiforme. In BioInformatics in Torun 2023 - BIT23, p. 34. BioInformatics in Torun 2023 (BIT23), Torun, Poland, June 29, 2023. (2023)

Kubica, J.; Madaj, R.; Orlowska, M.; Krarkowski, K.; Gront, D.; Dunin-Horkawicz, S.: Modeling of a putative programmed cell death receptor from Nostoc punctiforme. In 10th Prof. Krzysztof W. Szewczyk Intercollegiate Biotechnology Symposium: SYMBIOZA, O-17, p. 52. 10th Prof. Krzysztof W. Szewczyk Intercollegiate Biotechnology Symposium: SYMBIOZA, Warsaw, Poland, May 12, 2023 - May 14, 2023. (2023)

Martinez Goikoetxea, M.; Madaj, R.; Ludwiczak, J.; Lupas, A.; Dunin-Horkawicz, S.: Old folds can learn new tricks: Alphafold-driven insights on coiled-coil structure. 3D-BioInfo ICSB 3D-SIG ELIXIR Czech Republic Community Meeting in Structural Bioinformatics, Praha, Czech Republic (2023)