Publications of S-T Kim

Fan, L.; Fröhlich, K.; Melzer, E.; Pruitt, R.; Albert, I.; Zhang, L.; Joe, A.; Hua, C.; Song, Y.; Albert, M. et al.; Kim, S.-T.; Weigel, D.; Zipfel, C.; Chae, E.; Gust, A.; Nürnberger, T.: Genotyping-by-sequencing-based identification of Arabidopsis pattern recognition receptor RLP32 recognizing proteobacterial translation initiation factor IF1. Nature Communications 13 (1), 1294 (2022)

Barragan, C.; Wu, R.; Kim, S.-T.; Xi, W.; Habring, A.; Hagmann, J.; Van de Weyer, A.-L.; Zaidem, M.; Ho, W.; Wang, G. et al.; Bezrukov, I.; Weigel, D.; Chae, E.: RPW8/HR repeats control NLR activation in Arabidopsis thaliana. PLoS Genetics 15 (7), e1008313 (2019)

Zhu, W.; Zaidem, M.; Van de Weyer, A.-L.; Gutaker, R.; Chae, E.; Kim, S.-T.; Bemm, F.; Lei, L.; Todesco, M.; Schwab, R. et al.; Unger, F.; Beha, M.; Demar, M.; Weigel, D.: Modulation of ACD6 dependent hyperimmunity by natural alleles of an Arabidopsis thaliana NLR resistance gene. PLoS Genetics 14 (9), e1007628 (2018)

Mable, B.; Hagmann, J.; Kim, S.-T.; Adam, A.; Kilbride, E.; Weigel, D.; Stift, M.: What causes mating system shifts in plants? Arabidopsis lyrata as a case study. Heredity 118 (1), pp. 52 - 63 (2017)

Swiadek, M.; Proost, S.; Sieh, D.; Yu, J.; Todesco, M.; Jorzig, C.; Rodriguez Cubillos, A.; Plötner, B.; Nikoloski, Z.; Chae, E. et al.; Giavalisco, P.; Fischer, A.; Schröder, F.; Kim, S.-T.; Weigel, D.; Laitinen, R.: Novel allelic variants in ACD6 cause hybrid necrosis in local collection of Arabidopsis thaliana. New Phytologist 213 (2), pp. 900 - 915 (2017)

Arnold, B.; Kim, S.-T.; Bomblies, K.: Single Geographic Origin of a Widespread Autotetraploid Arabidopsis arenosa Lineage Followed by Interploidy Admixture. Molecular Biology and Evolution 32 (6), pp. 1382 - 1395 (2015)

Chae, E.; Bomblies, K.; Kim, S.-T.; Karelina, D.; Zaidem, M.; Ossowski, S.; Martín-Pizarro, C.; Laitinen, R.; Rowan, B.; Tenenboim, H. et al.; Lechner, S.; Demar, M.; Habring-Müller, A.; Lanz, C.; Rätsch, G.; Weigel, D.: Species-wide Genetic Incompatibility Analysis Identifies Immune Genes as Hot Spots of Deleterious Epistasis. Cell 159 (6), pp. 1341 - 1351 (2014)

Lim, E.-C.; Müller, J.; Hagmann, J.; Henz, S.; Kim, S.-T.; Weigel, D.: Trowel: a fast and accurate error correction module for Illumina sequencing reads. Bioinformatics 30 (22), pp. 3264 - 3265 (2014)

Todesco, M.; Kim, S.-T.; Chae, E.; Bomblies, K.; Zaidem, M.; Smith, L.; Weigel, D.; Laitinen, R.: Activation of the Arabidopsis thaliana Immune System by Combinations of Common ACD6 Alleles. PLoS Genetics 10 (7), e1004459 (2014)

Bomblies, K.; Yant, L.; Laitinen, R.; Kim, S.-T.; Hollister, J.; Warthmann, N.; Fitz, J.; Weigel, D.: Local-scale patterns of genetic variability, outcrossing, and spatial structure in natural stands of Arabidopsis thaliana. PLoS Genetics 6 (3), e1000890 (2010)

Todesco, M.; Kim, S.-T.; Chae, E.; Bomblies, K.; Zaidem, M.; Smith, L.; Weigel, D.; Laitinen, R.: Single-locus hybrid necrosis caused by common, co-occurring ACD6 alleles. In 25th International Conference on Arabidopsis Research (ICAR 2014), 351, p. 165. 25th International Conference on Arabidopsis Research (ICAR 2014), Vancouver, Canada, July 28, 2014 - August 01, 2014. (2014)

Chae, E.; Bomblies, K.; Kim, S.-T.; Karelina, D.; Ossowski, S.; Rowan, B.; Demar, M.; Lanz, C.; Weigel, D.: Repeated evolution of genetic incompatibilities involving a single NB-LRR gene cluster: lessons from hybrid necrosis studies in Arabidopsis thaliana. In XV Molecular Plant-Microbe Interactions (IS-MPMI 2012), CS12-6, p. 123. XV Molecular Plant-Microbe Interactions (IS-MPMI 2012), Kyoto, Japan, July 29, 2012 - August 02, 2012. (2012)

Bomblies, K.; Yant, L.; Laitinen, R.; Kim, S.-T.; Weigel, D.: Local-scale population structure and out-crossing in Arabidopsis thaliana. In 20th International Conference on Arabidopsis Research (ICAR 2009), C06, p. 57. 20th International Conference on Arabidopsis Research (ICAR 2009), Edinburgh, UK, June 30, 2009 - July 04, 2009. (2009)

Kim, S.-T.; Mao, J.-F.; Hagmann, J.; Lanz, C.; Cao, J.; Guo, Y.-L.; Schneeberger, K.; Weigel, D.: Contrasting whole-genome sequence diversity in the selfer Arabidopsis thaliana and the outcrosser A. lyrata. 13th Congress of the European Society for Evolutionary Biology (ESEB 2011), Tübingen, Germany (2011)

Kim, S.-T.; Weigel, D.: Differential Plastic Responses or Local Adaptions? Insights from Phenotyping Natural Populations. 21st International Conference on Arabidopsis Research (ICAR 2010), Yokohama, Japan (2010)

Guo, Y.-L.; Cheng, J.-F.; Hu, T.; Haberer, G.; Hollister, J.; Pattyn, P.; Clark, R.; Ossowski, S.; Schneeberger, K.; Kim, S.-T. et al.; Cao, J.; Lanz, C.; Otillar, R.; Bergelson, J.; Borevitz, J.; Hall, A.; Langley, C.; Neuffer, B.; Nasrallah, J.; Savolainen, O.; Wright, S.; Grigoriev, I.; Mayer, K.; Schmutz, J.; Van de Peer, Y.; Gaut, B.; Nordborg, M.; Rokshar, D.; Weigel, D.: The Arabidopsis lyrata genome: what can we learn from the close relative of Arabidopsis thaliana. 20th International Conference on Arabidopsis Research (ICAR 2009), Edinburgh, UK (2009)