Publications of H-G Drost

Gaubert, H.; Sanchez, D.; Drost, H.-G.; Paszkowski, J.: Developmental Restriction of Retrotransposition Activated in Arabidopsis by Environmental Stress. Genetics 207 (2), pp. 813 - 821 (2017)

Drost, H.-G.; Janitza, P.; Grosse, I.; Quint, M.: Cross-kingdom comparison of the developmental hourglas. Current Opinion in Genetics & Development 45, pp. 69 - 75 (2017)

Drost, H.-G.; Paszkowski, J.: Biomartr: genomic data retrieval with R. Bioinformatics 33 (8), pp. 1216 - 1217 (2017)

Drost, H.-G.; Bellstädt, J.; Ó'Maoiléidigh, D.; Silva, A.; Gabel, A.; Weinholdt, C.; Ryan, P.; Dekkers, B.; Bentsink, L.; Hilhorst, H. et al.; Ligterink, W.; Wellmer, F.; Grosse, I.; Quint, M.: Post-embryonic Hourglass Patterns Mark Ontogenetic Transitions in Plant Development. Molecular Biology and Evolution 33 (5), pp. 1158 - 1163 (2016)

Ryan, P.; Ó'Maoiléidigh, D.; Drost, H.-G.; Kwaśniewska, K.; Gabel, A.; Grosse, I.; Graciet, E.; Quint, M.; Wellmer, F.: Patterns of gene expression during Arabidopsis flower development from the time of initiation to maturation. BMC Genomics 16 (1), 488 (2015)

Drost, H.-G.; Gabel, A.; Grosse, I.; Quint, M.: Evidence for active maintenance of phylotranscriptomic hourglass patterns in animal and plant embryogenesis. Molecular Biology and Evolution 32 (5), pp. 1221 - 1231 (2015)

Dekkers, B.; Pearce, S.; van Bolderen-Veldkamp, R.; Marshall, A.; Widera, P.; Gilbert, J.; Drost, H.-G.; Bassel, G.; Müller, K.; King, J. et al.; Wood, A.; Grosse, I.; Quint, M.; Krasnogor, N.; Leubner-Metzger, G.; Holdsworth, M.; Bentsink, L.: Transcriptional dynamics of two seed compartments with opposing roles in Arabidopsis seed germination. Plant Physiology 163 (1), pp. 205 - 215 (2013)

Quint, M.; Drost, H.-G.; Gabel, A.; Ullrich, K.; Bönn, M.; Grosse, I.: A transcriptomic hourglass in plant embryogenesis. Nature 490 (7418), pp. 98 - 101 (2012)

Benoit, M.; Drost, H.-G.: A Predictive Approach to Infer the Activity and Natural Variation of Retrotransposon Families in Plants. In: Methods in Molecular Biology, Vol. 2250. Springer, US (2021)

Drost, H.-G.: Development of a phylogenetic transcriptome atlas of Arabidopsis thaliana embryo development. In: Informatiktage 2012: Fachwissenschaftlicher Informatik-Kongress, pp. 175 - 178 (Ed. Porada, L.). Informatiktage 2012: Fachwissenschaftlicher Informatik-Kongress, Bonn, Germany, March 23, 2012 - March 24, 2012. Gesellschaft für Informatik, Bonn, Germany (2012)

Drost, H.-G.: How ancient genes dominate key developmental transitions in organisms across the tree of life. In EURO EVO DEVO 2024, S14.3, p. 186. European Society for Evolutionary Developmental Biology EURO EVO DEVO 2024 (EED 2024), Helsinki, Finland, June 25, 2024 - June 28, 2024. (2024)

Lotharukpong, J.; Zheng, M.; Luthringer, R.; Drost, H.-G.; Coelho, S.: A transcriptomic hourglass in brown algae. In EURO EVO DEVO 2024, C01.3, p. 58. European Society for Evolutionary Developmental Biology EURO EVO DEVO 2024 (EED 2024), Helsinki, Finland, June 25, 2024 - June 28, 2024. (2024)

Teasdale, L.; Shirsekar, G.; Collenberg, M.; Murray, K.; Contreras-Garrido, A.; Schlegel, T.; van Ess, L.; Juettner, j.; Lanz, C.; Deusch, O. et al.; Fitz, J.; Mencia, R.; Velthoven, R.; Drost, H.-G.; Weigel, D.: Birth, Death, and Persistence in NLR Diversity in the Arabidopsis Immune System. In 12th International Congress of Plant Pathology (ICPP 2023), P5.5-010, p. 385. 12th International Congress of Plant Pathology (ICPP 2023), Lyon, France, August 20, 2023 - August 25, 2023. (2023)

Barrera-Redondo, J.; Lotharukpong, J.; Drost, H.-G.; Coelho, S.: Uncovering gene-family founder events during major evolutionary transitions in animals, plants and fungi using GenEra. In SMBE 2023, pp. 385 - 386. Society for Molecular Biology and Evolution Conference 2023 (SMBE 2023), Ferrara, Italy, July 23, 2023 - July 27, 2023. (2023)

Teasdale, L.; Shirsekar, G.; Collenberg, M.; Murray, K.; Contreras Garrido, A.; van Ess, L.; Juettner, j.; Lanz, C.; Fitz, J.; Drost, H.-G. et al.; Weigel, D.: Challenges of annotating complex genes in the Arabidopsis long read genome collection. In 33rd International Conference on Arabidopsis Research (ICAR 2023), WS02-06. 33rd International Conference on Arabidopsis Research (ICAR 2023), Chiba, Japan, June 05, 2023 - June 06, 2023. (2023)

Barrera Redondo, J.; Lotharukpong, J.; Drost, H.-G.; Krueger-Hadfield, S.; Coelho, S.: Uncovering gene-family founder events during major evolutionary transitions in animals, plants and fungi using GenEra. In 56th Population Genetics Group Meeting (PopGroup 56), p. 9. 56th Population Genetics Group Meeting (PopGroup 56), London, UK, January 04, 2023 - January 06, 2023. (2023)

Drost, H.-G.: Sensitive clustering of 20 billion protein sequences at tree-of-life scale using DIAMOND2 DeepClust. Max-Planck-Campus Tübingen: Distinguished Speaker Seminar Series (DSSS), Tübingen, Germany (2023)

Sushko, S.; Contreras-Garrido, A.; Drost, H.-G.; Weigel, D.: LTRpred2: De novo annotation of intact LTR-retrotransposons across the Eukaryotic Tree of Life. International Congress on Transposable Elements (ICTE 2024), Saint Malo, France (2024)

Gabel, A.; Schuster, C.; Drost, H.-G.; Meyerowitz, E.; Grosse, I.: Comprehensive annotations of alternative splicing, lncRNAs, and circRNAs in seven species of flowering plants. (submitted)

Teasdale, L.; Murray, K.; Collenberg, M.; Contreras-Garrido, A.; Schlegel, T.; van Ess, L.; Jüttner, J.; Lanz, C.; Deusch, O.; Fitz, J. et al.; Mencia, R.; van Velthoven, R.; Drost, H.-G.; Weigel, D.; Shirsekar, G.: Pangenomic context reveals the extent of intraspecic plant NLR evolution. (submitted)