Publications of H Elhabashy

Bodin, S.; Elhabashy, H.; Macdonald, E.; Winter, D.; Gauthier-Rouvière, C.: Flotillins in membrane trafficking and physiopathology. Biology of the Cell 117 (1), e202400134 (2025)

Röhl, A.; Netz, E.; Kohlbacher, O.; Elhabashy, H.: CLAUDIO: Automated structural analysis of cross-linking data. Bioinformatics 40 (4), btae146 (2024)

Podobnik, M.; Singh, A.; Fu, Z.; Dooley, C.; Frohnhöfer, H.; Firlej, M.; Stednitz, S.; Elhabashy, H.; Weyand, S.; Weir, J. et al.; Lu, J.; Nüsslein-Volhard, C.; Irion, U.: kcnj13 regulates pigment cell shapes in zebrafish and has diverged by cis-regulatory evolution between Danio species. Development 150 (16), dev.201627 (2023)

Singh, J.; Elhabashy, H.; Muthukottiappan, P.; Stepath, M.; Eisenacher, M.; Kohlbacher, O.; Gieselmann, V.; Winter, D.: Cross-linking of the endolysosomal system reveals potential flotillin structures and cargo. Nature Communications 13 (1), 6212 (2022)

Elhabashy, H.; Merino, F.; Alva, V.; Kohlbacher, O.; Lupas, A.: Exploring protein-protein interactions at the proteome level. Structure 30 (4), pp. 462 - 475 (2022)

Green, A.; Elhabashy, H.; Brock, K.; Maddamsetti, R.; Kohlbacher, O.; Marks, D.: Large-scale discovery of protein interactions at residue resolution using co-evolution calculated from genomic sequences. Nature Communications 12 (1), 1396 (2021)

Biggers, L.; Elhabashy, H.; Ackad, E.; Yousef, M.: Molecular dynamics simulations of an engineered T4 lysozyme exclude helix to sheet transition, and provide insights into long distance, intra-protein switchable motion. Protein Science 29 (2), pp. 542 - 554 (2020)

Elhabashy, H.; Netz, E.; Kohlbacher, O.: XLEC: Large-scale prediction and modeling of protein-protein interaction using sequence co-evolution and cross-linking data. 11th Symposium on Structural Proteomics (SSP 2023), Utrecht, The Netherlands (2023)

Elhabashy, H.: Proteome-scale discovery of protein interactions with structural resolution using sequence coevolution. 70th Lindau Nobel Laureate Meeting: Next Gen Science, Lindau, Germany (2021)

Röhl, A.; Netz, E.; Kohlbacher, O.; Elhabashy, H.: CLAUDIO: An automated cross-linking data analysis and validation workflow. 11th Symposium on Structural Proteomics (SSP 2023), Utrecht, The Netherlands (2023)

Elhabashy, H.; Kohlbacher, O.: Cross-Linking Mass Spectrometry and Evolutionary Couplings: A Hybrid Approach for Interaction Prediction and Structure Elucidation of Protein- Protein Complexes. 9th Symposium on Structural Proteomics (9SSP), Göttingen, Germany (2019)

Elhabashy, H.: Method Development for Large-Scale Prediction and Modelling of Protein-Protein Interactions. Dissertation, Eberhard-Karls-Universität, Tübingen, Germany (2023)

Elhabashy, H.: Method Development for Large-Scale Prediction and Modeling of Protein-Protein Interactions. Dissertation, Eberhard-Karls-Universität, Tübingen, Germany (2023)

Elhabashy, H.: Molecular Dynamics Simulation of an Engineered T4 Lysozyme Protein with Potential Nano-Biotechnological Applications. Master, 82 pp., American University in Cairo, Cairo, Egypt (2016)