Publications
_{Mathematical Approaches to Fungal Biology}

Vega, E.; González-Zamorano, L.; Cebadera, E.; Barros, L.; da Silveira, T.; Vidal-Diez de Ulzurrun, G.; Tardio, J.; Lázaro, A.; Cámara, M.; Fernández-Ruíz, V. et al.; Morales, P.: Wild Myrtus communis L. Fruit By-Product as a Promising Source of a New Natural Food Colourant: Optimization of the Extraction Process and Chemical Characterization. Foods 14 (3), 520 (2025)

Cuo, C.-Y.; Tay, R.; Lin, H.-C.; Juan, S.-C.; Vidal-Diez de Ulzurrun, G.; Chang, Y.-C.; Hoki, J.; Schroeder, F.; Hsueh, Y.-P.: The nematode-trapping fungus Arthrobotrys oligospora detects prey pheromones via G protein-coupled receptors. Nature Microbiology 9 (7), pp. 1738 - 1751 (2024)

Lin, H.-C.; Vidal-Diez de Ulzurrun, G.; Chen, S.-A.; Yang, C.-T.; Tay, R.; Iizuka, T.; Huang, T.-Y.; Cuo, C.-Y.; Gonçalves, A.; Lin, S.-Y. et al.; Chang, Y.-C.; Stajich, J.; Schwarz, E.; Hsueh, Y.-P.: Key processes required for the different stages of fungal carnivory by a nematode-trapping fungus. PLOS Biology 21 (11), e3002400 (2023)

Huang, T.-Y.; Lee, Y.-Y.; Vidal-Diez de Ulzurrun, G.; Hsueh, Y.-P.: Forward genetic screens identified mutants with defects in trap morphogenesis in the nematode-trapping fungus Arthrobotrys oligospora. G3: Genes, Genomes, Genetics 11 (2), jkaa022 (2021)

Lee, Y.-Y.; Vidal-Diez de Ulzurrun, G.; Schwarz, E.; Stajich, J.; Hsueh, Y.-P.: Genome sequence of the Oyster mushroom Pleurotus ostreatus strain PC9. G3: Genes, Genomes, Genetics 11 (2), jkaa008 (2021)

Vidal-Diez de Ulzurrun, G.; Lee, Y.-Y.; Stajich, J.; Schwarz, E.; Hsueh, Y.-P.: Genomic analyses of two Italian oyster mushroom Pleurotus pulmonarius strains. G3: Genes, Genomes, Genetics 11 (2), jkaa007 (2021)

Yang, C.-T.; Vidal-Diez de Ulzurrun, G.; Gonçalves, A.; Lin, H.-C.; Chang, C.-W.; Huang , T.-Y.; Chen, S.-A.; Lai, C.-K.; Tsai, I.; Schroeder, F. et al.; Stajich, J.; Hsueh, Y.-P.: Natural diversity in the predatory behavior facilitates the establishment of a robust model strain for nematode-trapping fungi. Proceedings of the National Academy of Sciences of the United States of America 117 (12), pp. 6762 - 6770 (2020)

Vidal-Diez de Ulzurrun, G.; Huang, T.-Y.; Chang, C.-W.; Lin, H.-C.; Hsueh, Y.-P.: Fungal feature tracker (FFT): A tool for quantitatively characterizing the morphology and growth of filamentous fungi. PLOS Computational Biology 15 (10), e1007428 (2019)

Wang, G.; Lopez-Molina, C.; Vidal-Diez de Ulzurrun, G.; De Baets, B.: Noise-robust line detection using normalized and adaptive second-order anisotropic Gaussian kernels. Signal Processing 160, pp. 252 - 262 (2019)

De Ligne, L.; Vidal-Diez de Ulzurrun, G.; Baetens, J.; Van den Bulcke, J.; Van Acker, J.; De Baets, B.: Analysis of spatio-temporal fungal growth dynamics under different environmental conditions. IMA Fungus 10 (7) (2019)

Vidal-Diez de Ulzurrun, G.; Hsueh, Y.-P.: Predator-prey interactions of nematode-trapping fungi and nematodes: both sides of the coin. Applied Microbiology and Biotechnology 102 (9), pp. 3939 - 3949 (2018)

Vidal-Diez de Ulzurrun, G.; Baetens, J.; Van den Bulcke, J.; De Baets, B.: Modelling three-dimensional fungal growth in response to environmental stimuli. Journal of Theoretical Biology 414, pp. 35 - 49 (2017)

Lopez-Molina, C.; Vidal-Diez de Ulzurrun, G.; Baetens, J.; Van den Bulcke, J.; De Baets, B.: Unsupervised ridge detection using second order anisotropic Gaussian kernels. Signal Processing 116, pp. 55 - 67 (2015)

Vidal-Diez de Ulzurrun, G.; Baetens, J.; Van den Bulcke, J.; Lopez-Molina, C.; De Windt, I.; De Baets, B.: Automated image-based analysis of spatio-temporal fungal dynamics. Fungal Genetics and Biology 84, pp. 12 - 25 (2015)

Vidal-Diez de Ulzurrun, G.; Juan, S.-C.; Lin, T.-H.; Hsueh, Y.-P.: Nematode-Trapping Fungi and Caenorhabditis elegans as a Model System for Predator–Prey Interactions. In: Fungal Associations, 11, pp. 273 - 292 (Eds. Hsueh, Y.-P.; Blackwell, M.). Springer International Publishing, Cham, Switzerland (2024)

Vidal-Diez de Ulzurrun, G.; Huang, T.-Y.; Hsueh, Y.-P.: Fungal feature tracker 2.0: unleashing the power of image analysis in fungal research. In 17th European Conference on Fungal Genetics (ECFG17), CS 3.1.7, p. 102. 17th European Conference on Fungal Genetics (ECFG 2025), Dublin, Ireland, March 02, 2025 - March 05, 2025. (2025)

Kuo, C.-Y.; Tay, R.; Lin, H.-C.; Juan, S.-C.; Vidal-Diez de Ulzurrun, G.; Hoki, J.; Schroeder, F.; Hsueh, Y.-P.: A predatory fungus detects prey pheromones via G-protein-coupled receptors. In 32nd Fungal Genetics Conference, 101, p. 37. 32nd Fungal Genetics Conference, Pacific Grove, CA, USA, March 12, 2024 - March 17, 2024. (2024)

Lin, H.-C.; Vidal-Diez de Ulzurrun, G.; Chen, S.-A.; Yang, C.-T.; Gonçalves, P.; Kuo, C.-Y.; Huang, T.-Y.; Schwarz, E.; Hsueh, Y.-P.: Unraveling the biology of Nematophagy During a Fungal-Nematode Predator-Prey Interaction Using Time-Course Transcriptomic analysis. In 16th European Conference on Fungal Genetics: ECFG16, CS3.3.8, pp. 244 - 245. 16th European Conference on Fungal Genetics (ECFG16), Innsbruck, Austria, March 05, 2023 - March 08, 2023. (2023)

Kuo, C.-Y.; Vidal-Diez de Ulzurrun, G.; Hsueh, Y.-P.: Functional analyses of predicted G-protein-coupled receptors in nematode-trapping fungus, Arthrobotrys oligospora. In 31st Fungal Genetics Conference, 655V, p. 195. 31st Fungal Genetics Conference (FGC 2022), Pacific Grove, CA, USA, March 15, 2022 - March 20, 2022. (2022)

Lin, H.-C.; Vidal-Diez de Ulzurrun, G.; Chen, S.-A.; Yang, C.-T.; Gonçalves, P.; Kuo, C.-Y.; Huang, T.-Y.; Schwarz, E.; Hsueh, Y.-P.: Unraveling the biology of Nematophagy During a Fungal-Nematode Predator-Prey Interaction Using Time-Course Transcriptomic analysis. In 31st Fungal Genetics Conference, 135, pp. 38 - 39. 31st Fungal Genetics Conference (FGC 2022), Pacific Grove, CA, USA, March 15, 2022 - March 20, 2022. (2022)