Publications of KM Borgwardt

Borgwardt, K.: Two-locus association mapping in subquadratic time. Seminar Series: European Molecular Biology Laboratory, Heidelberg, Germany (2011)

Borgwardt, K.; Shervashidze, N.: The Weisfeiler-Lehman Kernel. Computational Approaches for Analyzing Complex Biological Systems 2010, Tübingen, Germany (2010)

van Leeuwen, E.; Smouter, F.; Kam-Thong, T.; Karbalai, N.; Borgwardt, K.; van Duijn, M.; Karssen, L.; Müller-Myhsok, B.: Detecting SNP interactions associated with HDL using GPUs. European Human Genetics Conference (ESHG 2012), Nürnberg, Germany (2012)

Grimm, D.; Greshake, B.; Stegle, O.; Lippert, C.; Schölkopf, B.; Weigel, D.; Borgwardt, K.: easyGWAS: A central resource for efficient performance of genome-wide association studies. (2012)

Grimm, D.; Hagmann, J.; Koenig, D.; Weigel, D.; Borgwardt, K.: Support Vector Machines for finding deletions and short insertions using paired-end short reads. 19th Annual International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology (ISMB ECCB 2011), Wien, Austria (2011)

Drewe, P.; Stegle, O.; Bohnert, R.; Borgwardt, K.; Rätsch, G.: Statistical tests for detecting differential RNA-transcript expression. 4th Berlin Summer Meeting: “Computational & Experimental Molecular Biology Meet”, Berlin, Germany (2011)

Stegle, O.; Drewe, P.; Bohnert, R.; Borgwardt, K.; Rätsch, G.: Statistical Tests for Detecting Differential RNA-Transcript Expression from Read Counts. Joint Cold Spring Harbor Laboratory/Wellcome Trust Conference: Genome Informatics, Hinxton, UK (2010)

Shervashidze, N.; Smola, A.; Borgwardt, K.: Scalable graph kernels with approximate matching of subtree patterns. 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB 2010), Boston, MA, USA (2010)

Drewe, P.; Stegle, O.; Bohnert, R.; Borgwardt, K.; Rätsch, G.: Statistical Tests for Detecting Differential RNA-Transcript Expression from Read Counts. 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB 2010), Boston, MA, USA (2010)

Lippert, C.; Stegle, O.; Nickisch, H.; Borgwardt, K.; Weigel, D.: Experimental design for genome-wide association studies. 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB 2010), Boston, MA, USA (2010)

Klotzbücher, K.; Kobayashi, Y.; Shervashidze, N.; Borgwardt, K.; Weigel, D.: A flowering-time gene network model for association analysis in Arabidopsis thaliana. German Conference on Bioinformatics (GCB 2009), Halle, Germany (2009)