Publications of S Dunin-Horkawicz

Machnicka, M.; Milanowska, K.; Oglou, O.; Purta, E.; Kurkowska, M.; Olchowik, A.; Januszewski, W.; Kalinowski, S.; Dunin-Horkawicz, S.; Rother, K. et al.; Helm, M.; Bujnicki, J.; Grosjean, H.: MODOMICS: a database of RNA modification pathways - 2013 update. Nucleic Acids Research (London) 41 (Database issue), pp. D262 - D267 (2013)

Hartmann, M.; Grin, I.; Dunin-Horkawicz, S.; Deiss, S.; Linke, D.; Lupas, A.; Hernandez Alvarez, B.: Complete fiber structures of complex trimeric autotransporter adhesins conserved in enterobacteria. Proceedings of the National Academy of Sciences of the United States of America 109 (51), pp. 20907 - 20912 (2012)

Poleszak, K.; Kaminska, K.; Dunin-Horkawicz, S.; Lupas, A.; Skowronek, K.; Bujknicki, J.: Delineation of structural domains and identification of functionally important residues in DNA repair enzyme exonuclease VII. Nucleic Acids Research (London) 40 (16), pp. 8163 - 8174 (2012)

Ferris, H.; Dunin-Horkawicz, S.; Hornig, N.; Hulko, M.; Martin, J.; Schultz, J.; Zeth, K.; Lupas, A.; Coles, M.: Mechanism of regulation of receptor histidine kinases. Structure 20 (1), pp. 56 - 66 (2012)

Ferris, H.; Dunin-Horkawicz, S.; García Mondéjar, L.; Hulko, M.; Hantke, K.; Martin, J.; Schultz, J.; Zeth, K.; Lupas, A.; Coles, M.: The mechanisms of HAMP-mediated signaling in transmembrane receptors. Structure 19 (3), pp. 378 - 385 (2011)

Dunin-Horkawicz, S.; Lupas, A.: Measuring the conformational space of square four-helical bundles with the program samCC. Journal of Structural Biology 170 (2), pp. 226 - 235 (2010)

Hernandez Alvarez, B.; Gruber, M.; Ursinus, A.; Dunin-Horkawicz, S.; Lupas, A.; Zeth, K.: A transition from strong right-handed to canonical left-handed supercoiling in a conserved coiled-coil segment of trimeric autotransporter adhesins. Journal of Structural Biology 170 (2), pp. 236 - 245 (2010)

Dunin-Horkawicz, S.; Lupas, A.: Comprehensive analysis of HAMP domains: implications for transmembrane signal transduction. Journal of Molecular Biology 397 (5), pp. 1156 - 1174 (2010)

Hartmann, M.; Ridderbusch, O.; Zeth, K.; Albrecht, R.; Testa, O.; Woolfson, D.; Sauer, G.; Dunin-Horkawicz, S.; Lupas, A.; Hernandez Alvarez, B.: A coiled-coil motif that sequesters ions to the hydrophobic core. Proceedings of the National Academy of Sciences of the United States of America 106 (40), pp. 16950 - 16955 (2009)

Alva, V.; Dunin-Horkawicz, S.; Habeck, M.; Coles, M.; Lupas, A.: The GD box: a widespread noncontiguous supersecondary structural element. Protein Science 18 (9), pp. 1961 - 1966 (2009)

Alva, V.; Dunin-Horkawicz, S.; Habeck, M.; Coles, M.; Lupas, A.: The GD box: A widespread non-contiguous supersecondary structural element. Protein Science 18 (9), pp. 1961 - 1966 (2009)

Serek-Heuberger, J.; Hobel, C.; Dunin-Horkawicz, S.; Rockel, B.; Martin, J.; Lupas, A.: Two unique membrane-bound AAA proteins from Sulfolobus solfataricus. Biochemical Society Transactions 37 (1), pp. 118 - 122 (2009)

Czerwoniec, A.; Dunin-Horkawicz, S.; Purta, E.; Kaminska, K.; Kasprzak, J.; Bujnicki, J.; Grosjean, H.; Rother, K.: MODOMICS: a database of RNA modification pathways, update 2008. Nucleic Acids Research (London) 37 (Database issue), pp. D118 - D121 (2009)

Tkaczuk, K.; Dunin-Horkawicz, S.; Purta, E.; Bujnicki, J.: Structural and evolutionary bioinformatics of the SPOUT superfamily of methyltransferases. BMC Bioinformatics 8, 73 (2007)

Dunin-Horkawicz, S.; Czerwoniec, A.; Gajda, M.; Feder, M.; Grosjean, H.; Bujnicki, J.: MODOMICS: a database of RNA modification pathways. Nucleic Acids Research (London) 34 (Database issue), pp. D145 - D149 (2006)

Lupas, A.; Bassler, J.; Dunin-Horkawicz, S.: The Structure and Topology of α-Helical Coiled Coils. In: Fibrous Proteins: Structures and Mechanisms, pp. 95 - 129 (Eds. Parry, D.; Squire, J.). Springer, Cham, Switzerland (2017)

Smug, B.; Szczepaniak, K.; Dunin-Horkawicz, S.; Rocha, E.; Mostowy, R.: How phages play with LEGO: studying protein-level mosaicism in phages and its evolutionary implications. In The Local Pangenome, 40, p. 88. The Local Pangenome, Alicante, Spain, October 25, 2023 - October 28, 2023. (2023)

Madaj, R.; Orlowska, M.; Kaminski, K.; Pawlicki, K.; Dunin-Horkawicz, S.: Side mutants of connexin proteins as a cause of non-functional gap junction beta channels: a structural bioinformatics approach. In BioInformatics in Torun 2023 - BIT23, p. 16. BioInformatics in Torun 2023 (BIT23), Torun, Poland, June 29, 2023. (2023)

Orlowska, M.; Madaj, R.; Kubica, J.; Kaminski, K.; Dunin-Horkawicz, S.: Bioinformatics approach for programmed cell death receptor from Nostoc punctiforme. In BioInformatics in Torun 2023 - BIT23, p. 34. BioInformatics in Torun 2023 (BIT23), Torun, Poland, June 29, 2023. (2023)

Kubica, J.; Madaj, R.; Orlowska, M.; Krarkowski, K.; Gront, D.; Dunin-Horkawicz, S.: Modeling of a putative programmed cell death receptor from Nostoc punctiforme. In 10th Prof. Krzysztof W. Szewczyk Intercollegiate Biotechnology Symposium: SYMBIOZA, O-17, p. 52. 10th Prof. Krzysztof W. Szewczyk Intercollegiate Biotechnology Symposium: SYMBIOZA, Warsaw, Poland, May 12, 2023 - May 14, 2023. (2023)