Publications of E Bornberg-Bauer

Grandchamp, A.; Berk, K.; Dohmen, E.; Bornberg-Bauer, E.: New Genomic Signals Underlying the Emergence of Human Proto-Genes. Genes 13 (2), 284 (2022)

Buchholz, P.; van Loo , B.; Eenink, B.; Bornberg-Bauer, E.: Ancestral sequences of a large promiscuous enzyme family correspond to bridges in sequence space in a network representation. Interface: Journal of the Royal Society 18 (184), 20210389 (2021)

Rivard, E.; Ludwig, A.; Patel, P.; Grandchamp, A.; Arnold, S.; Berger, A.; Scott, E.; Kelly, B.; Mascha, G.; Bornberg-Bauer, E. et al.; Findlay, G.: A putative de novo evolved gene required for spermatid chromatin condensation in Drosophila melanogaster. PLoS Genetics 17 (9), e1009787 (2021)

Bornberg-Bauer, E.; Hlouchova, K.; Lange, A.: Structure and function of naturally evolved de novo proteins. Current Opinion in Structural Biology 68, pp. 175 - 183 (2021)

Harrison, M.; Jaimes Niño, L.; Almeida Rodrigues, M.; Ryll, J.; Flatt, T.; Oettler, J.; Bornberg-Bauer, E.: Gene Coexpression Network Reveals Highly Conserved, Well-Regulated Anti-Ageing Mechanisms in Old Ant Queens. Genome Biology and Evolution 13 (6), evab093 (2021)

Thomas, G.; Dohmen, E.; Hughes, D.; Murali, S.; Poelchau, M.; Glastad, K.; Anstead, C.; Ayoub, N.; Batterham, P.; Bellair, M. et al.; Binford, G.; Chao, H.; Chen, Y.; Childers, C.; Dinh, H.; Doddapaneni, H.; Duan, J.; Dugan , S.; Espito, L.; Friedrich, M.; Garb, J.; Gasser, R.; Goodisman, M.; Gundersen-Rindal, D.; Han, Y.; Handler, A.; Hatakeyama, M.; Hering, L.; Hunter, W.; Ioannidis, P.; Jayaseelan, J.; Kalra, D.; Khila, A.; Korhonen, P.; Lee, C.; Lee, S.; Li, Y.; Lindsey, A.; Mayer, G.; McGregor, A.; McKenna, D.; Misof, B.; Munidasa, M.; Munoz-Torres, M.; Muzny, D.; Niehuis, O.; Osuji-Lacy, N.; Palli, S.; Panfilio, K.; Pechmann, M.; Perry, T.; Peters, R.; Poynton, H.; Prpic, N.; Qu, J.; Rotenberg, D.; Schal, C.; Schoville, S.; Scully, E.; Skinner, E.; Sloan, D.; Stouthamer, R.; Strand, M.; Szucsich, N.; Wijeratne, A.; Young, N.; Zattara, E.; Benoit, J.; Zdobnov, B.; Pfrender, M.; Hackett, K.; Werren, J.; Worley, K.; Gibbs, B.; Chipman, A.; Waterhouse, R.; Bornberg-Bauer, E.; Hahn, M.; Richards, S.: Gene content evolution in the arthropods. Genome Biology 21, 15 (2020)

van Loo, B.; Schober, M.; Valkov, E.; Heberlein, M.; Bornberg-Bauer, E.; Faber, K.; Hyvönen, M.; Hollfelder, F.: Structural and Mechanistic Analysis of the Choline Sulfatase from Sinorhizobium melliloti: A Class I Sulfatase Specific for an Alkyl Sulfate Ester. Journal of Molecular Biology 430 (7), pp. 1004 - 1023 (2018)

Feldmeyer, B.; Bornberg-Bauer, E.; Dohmen, E.; Fouks, B.; Heckenhauer, J.; Huylmans, A.; Jones, A.; Stolle, E.; Harrison, M.: Comparative Evolutionary Genomics in Insects. In: Comparative Genomics: Methods and Protocols, pp. 473 - 514 (Eds. Setubal, J.; Stadler, P.; Stoye, J.). Humana, New York, NY, USA (2024)

Lebherz, M.; Fouks, B.; Schmidt, J.; Bornberg-Bauer, E.; Grandchamp, A.: DNA Transposons favour de novo transcript emergence through enrichment of transcription factor binding motifs. In SMBE 2024, p. 611. Society for Molecular Biology and Evolution Conference 2024 (SMBE 2024), Puerto Vallarta, Mexico, July 07, 2024 - July 11, 2024. (2024)

Eicholt, L.; Middendorf, L.; Bornberg-Bauer, E.: From de novo a beginning: Identifying structures and activites of de novo proteins. In SMBE 2023, pp. 46 - 47. Society for Molecular Biology and Evolution Conference 2023 (SMBE 2023), Ferrara, Italy, July 23, 2023 - July 27, 2023. (2023)

Eicholt, L.; Lange, A.; Bornberg-Bauer, E.: De novo Proteins: Expression and Structural Analysis. In Advances in Protein Folding, Evolution and Design (APFED 2022), p. 66. Advances in Protein Folding, Evolution and Design (APFED 2022), Bayreuth, Germany, April 06, 2022 - April 08, 2022. (2022)

Heames, B.; Buchel, F.; Aubel, M.; Tretyachenko, V.; Lange, A.; Bornberg-Bauer, E.; Hlouchova, K.: Experimental characterisation of de novo proteins and their unevolved random-sequence counterparts. In Advances in Protein Folding, Evolution and Design (APFED 2022), p. 40. Advances in Protein Folding, Evolution and Design (APFED 2022), Bayreuth, Germany, April 06, 2022 - April 08, 2022. (2022)

Harrison, M.; Séguret, A.; Finke, C.; Jongepier, E.; Grandjamp, A.; Stoldt, M.; Heinze, J.; Foitzik, S.; Bornberg-Bauer, E.; Feldmeyer, B.: Convergent Evolutionary Traces of Genomic Innovations and Depletions in Socially Parasitic Ants. (submitted)

Jones, A.; Mikhailova, A.; Aumont, C.; Berger, J.; Bornberg-Bauer, E.; Liu, C.; He, S.; Wang, Z.; Winkler, S.; Legendre, F. et al.; McMahon, D.; Harrison, M.: Cryptocercus genomes expand knowledge of adaptations to xylophagy and termite sociality. (submitted)

Eenink, B.; Heberlein, M.; Holstein, J.; Lange, A.; Dilkaute, C.; Kaminski, T.; Bornberg-Bauer, E.; Jose, J.; Hollfelder, F.; van Loo, B.: Ancestral aryl sulfatases in the alkaline phosphatase family allow for greater increases in catalytic efficiency than extant variants. (submitted)

Jones, A.; Dohmen, E.; Berger, J.; Legendre, F.; Harrison, M.; Bornberg-Bauer, E.: Reduced regulatory complexity associated with the evolutionary transition to sociality from cockroaches to termites despite evolutionary parallels with Hymenoptera. (submitted)