Publications of D Weigel

Michael, T.; Jupe, F.; Bemm, F.; Motley, S.; Sandoval, J.; Lanz, C.; Loudet, O.; Weigel, D.; Ecker, J.: High contiguity Arabidopsis thaliana genome assembly with a single nanopore flow cell. Nature Communications 9, 541 (2018)

Salvador-Guirao, R.; Baldrich, P.; Weigel, D.; Rubio-Somoza, I.; San Segundo, B.: The MicroRNA miR773 Is Involved in the Arabidopsis Immune Response to Fungal Pathogens. Molecular Plant-Microbe Interactions 31 (2), pp. 249 - 259 (2018)

Stein, J.; Yu, Y.; Copetti, D.; Zwickl, D.; Zhang, L.; Zhang, C.; Chougule, K.; Gao, D.; Iwata, A.; Goicoechea, J. et al.; Wei, S.; Wang, J.; Liao, Y.; Wang, M.; Jacquemin, J.; Becker, C.; Kudrna, D.; Zhang, J.; Londono, C.; Song, X.; Lee, S.; Sanchez, P.; Zuccolo, A.; Ammiraju, J.; Talag, J.; Danowitz, A.; Rivera, L.; Gschwend, A.; Noutsos, C.; Wu, C.; Kao, S.; Zeng, J.; Wei, F.; Zhao, Q.; Feng, Q.; El Baidouri, M.; Carpentier, M.; Lasserre, E.; Cooke, R.; Rosa Farias, D.; da Maia, L.; Dos Santos, R.; Nyberg, K.; McNally, K.; Mauleon, R.; Alexandrov, N.; Schmutz, J.; Flowers, D.; Fan, C.; Weigel, D.; Jena, K.; Wicker, T.; Chen, M.; Han, B.; Henry, R.; Hsing, Y.; Kurata, N.; de Oliveira, A.; Panaud, O.; Jackson, S.; Machado, C.; Sanderson, M.; Long, M.; Ware, D.; Wing, R.: Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza. Nature Genetics 50 (2), pp. 285 - 296 (2018)

Stein, J.; Yu, Y.; Copetti, D.; Zwickl, D.; Zhang, L.; Zhang, C.; Chougule, K.; Gao, D.; Iwata, A.; Goicoechea, J. et al.; Wei, S.; Wang, J.; Liao, Y.; Wang, M.; Jacquemin, J.; Becker, C.; Kudrna, D.; Zhang, J.; Londono, C.; Song, X.; Lee, S.; Sanchez, P.; Zuccolo, A.; Ammiraju, J.; Talag, J.; Danowitz, A.; Rivera, L.; Gschwend, A.; Noutsos, C.; Wu, C.; Kao, S.; Zeng, J.; Wei, F.; Zhao, Q.; Feng, Q.; El Baidouri, M.; Carpentier, M.; Lasserre, E.; Cooke, R.; Rosa Farias, D.; da Maia, L.; Dos Santos, R.; Nyberg, K.; McNally, K.; Mauleon, R.; Alexandrov, N.; Schmutz, J.; Flowers, D.; Fan, C.; Weigel, D.; Jena, K.; Wicker, T.; Chen, M.; Han, B.; Henry, R.; Hsing, Y.; Kurata, N.; de Oliveira, A.; Panaud, O.; Jackson, S.; Machado, C.; Sanderson, M.; Long, M.; Ware, D.; Wing, R.: Publisher Correction: Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza. Nature Genetics 50 (11), p. 1618 (2018)

Alhajturki, D.; Muralidharan, S.; Nurmi, M.; Rowan, B.; Lunn, J.; Boldt, H.; Salem, M.; Alseekh, S.; Jorzig, C.; Feil, R. et al.; Giavalisco, P.; Fernie, A.; Weigel, D.; Laitinen, R.: Dose-dependent interactions between two loci trigger altered shoot growth in BG-5 x Krotzenburg-0 (Kro-0) hybrids of Arabidopsis thaliana. New Phytologist 217 (1), pp. 392 - 406 (2018)

Lang, P.; Christie, M.; Dogan, E.; Schwab, R.; Hagmann, J.; Van de Weyer, A.-L.; Scacchi, E.; Weigel, D.: A Role for the F-Box Protein HAWAIIAN SKIRT in Plant microRNA Function. Plant Physiology 176 (1), pp. 730 - 741 (2018)

Togninalli, M.; Seren, U.; Meng, D.; Fitz, J.; Nordborg, M.; Weigel, D.; Borgwardt, K.; Korte, A.; Grimm, D.: The AraGWAS Catalog: a curated and standardized Arabidopsis thaliana GWAS catalog. Nucleic Acids Research (London) 46 (D1), pp. D1150 - D1156 (2018)

Liu, C.; Cheng, Y.-J.; Wang, J.-W.; Weigel, D.: Prominent topologically associated domains differentiate global chromatin packing in rice from Arabidopsis. Nature Plants 3 (9), pp. 742 - 748 (2017)

Swarts, K.; Gutaker, R.; Benz, B.; Blake, M.; Bukowski, R.; Holland, J.; Kruse-Peeples, M.; Lepak, N.; Prim, L.; Romay, M. et al.; Ross-Ibarra, J.; de Jesus Sanchez-Gonzalez, J.; Schmidt, C.; Schünemann, V.; Krause, J.; Matson, R.; Weigel, D.; Buckler, E.; Burbano, H.: Genomic estimation of complex traits reveals ancient maize adaptation to temperate North America. Science 357 (6350), pp. 512 - 515 (2017)

Xin, R.; Zhu, L.; Salomé, P.; Mancini, E.; Marshall, C.; Harmon, F.; Yanovsky, M.; Weigel, D.; Huq, E.: SPF45-related splicing factor for phytochrome signaling promotes photomorphogenesis by regulating pre-mRNA splicing in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America 114 (33), pp. E7018 - E7027 (2017)

Zhu, W.; Hu, B.; Becker, C.; Doğan, E.; Berendzen, K.; Weigel, D.; Liu, C.: Altered chromatin compaction and histone methylation drive non-additive gene expression in an interspecific Arabidopsis hybrid. Genome Biology 18, 157 (2017)

Daccord, N.; Celton, J.-M.; Linsmith, G.; Becker, C.; Choisne, N.; Schijlen, E.; van de Geest, H.; Bianco, L.; Micheletti, D.; Velasco, R. et al.; Di Pierro, E.; Gouzy, J.; Rees, D.; Guerif, P.; Muranty, H.; Durel, C.-E.; Laurens, F.; Lespinasse, Y.; Gaillard, S.; Aubourg, S.; Quesneville, H.; Weigel, D.; van de Weg, E.; Troggio, M.; Bucher, E.: High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development. Nature Genetics 49 (7), pp. 1099 - 1106 (2017)

Kasulin, L.; Rowan, B.; Leon, R.; Schünemann, V.; Weigel, D.; Botto, J.: A single haplotype hyposensitive to light and requiring strong vernalization dominates Arabidopsis thaliana populations in Patagonia, Argentina. Molecular Ecology 26 (13), pp. 3389 - 3404 (2017)

Ploetner, B.; Nurmi, M.; Fischer, A.; Watanabe, M.; Schneeberger, K.; Holm, S.; Vaid, N.; Schoettler, M.; Walther, D.; Hoefgen, R. et al.; Weigel, D.; Laitinen, R.: Chlorosis caused by two recessively interacting genes reveals a role of RNA helicase in hybrid breakdown in Arabidopsis thaliana. The Plant Journal 91 (2), pp. 251 - 262 (2017)

Tran, D.; Chung, E.-H.; Habring-Müller, A.; Demar, M.; Schwab, R.; Dangl, J.; Weigel, D.; Chae, E.: Activation of a Plant NLR Complex through Heteromeric Association with an Autoimmune Risk Variant of Another NLR. Current Biology 27 (8), pp. 1148 - 1160 (2017)

Catoni, M.; Griffiths, J.; Becker, C.; Zabet, N.; Bayon, C.; Dapp, M.; Lieberman-Lazarovich, M.; Weigel, D.; Paszkowski, J.: DNA sequence properties that predict susceptibility to epiallelic switching. EMBO Journal 36 (5), pp. 617 - 628 (2017)

Ikeda, Y.; Pelissier, T.; Bourguet, P.; Becker, C.; Pouch-Pelissier, M.-N.; Pogorelcnik, R.; Weingartner, M.; Weigel, D.; Deragon, J.-M.; Mathieu, O.: Arabidopsis proteins with a transposon-related domain act in gene silencing. Nature Communications 8, 15122 (2017)

Nekrasov, V.; Wang, C.; Win, J.; Lanz, C.; Weigel, D.; Kamoun, S.: Rapid generation of a transgene-free powdery mildew resistant tomato by genome deletion. Scientific Reports 7, 482 (2017)

Soto-Suarez, M.; Baldrich, P.; Weigel, D.; Rubio-Somoza, I.; San Segundo, B.: The Arabidopsis miR396 mediates pathogen-associated molecular pattern-triggered immune responses against fungal pathogens. Scientific Reports 7, 44898 (2017)

Lee, C.-R.; Svardal, H.; Farlow, A.; Exposito-Alonso, M.; Ding, W.; Novikova, P.; Alonso-Blanco, C.; Weigel, D.; Nordborg, M.: On the post-glacial spread of human commensal Arabidopsis thaliana. Nature Communications 8, 14458 (2017)