Publications of K Schneeberger

Schneeberger, K.; Weigel, D.: Fast-forward genetics enabled by new sequencing technologies. Trends in Plant Science 16 (5), pp. 282 - 288 (2011)

Laitinen, R.; Schneeberger, K.; Jelly, N.; Ossowski, S.; Weigel, D.: Identification of a spontaneous frame shift mutation in a nonreference Arabidopsis accession using whole genome sequencing. Plant Physiology 153 (2), pp. 652 - 654 (2010)

Ossowski, S.; Schneeberger, K.; Lucas-Lledó, J.; Warthmann, N.; Clark, R.; Shaw, R.; Weigel, D.; Lynch, M.: The rate and molecular spectrum of spontaneous mutations in Arabidopsis thaliana. Science 327 (5961), pp. 92 - 94 (2010)

Werner, S.; Wollmann, H.; Schneeberger, K.; Weigel, D.: Structure determinants for accurate processing of miR172a in Arabidopsis thaliana. Current Biology 20 (1), pp. 42 - 48 (2010)

Out, A.; van Minderhout, I.; Goeman, J.; Ariyurek, Y.; Ossowski, S.; Schneeberger, K.; Weigel, D.; van Galen, M.; Taschner, P.; Tops, C. et al.; Breuning, M.; van Ommen, G.-J.; den Dunnen, J.; Devilee, P.; Hes, F.: Deep sequencing to reveal new variants in pooled DNA samples. Human Mutations 30 (12), pp. 1703 - 1712 (2009)

Mirouze, M.; Reinders, J.; Bucher, E.; Nishimura, T.; Schneeberger, K.; Ossowski, S.; Cao, J.; Weigel, D.; Paszkowski, J.; Mathieu, O.: Selective epigenetic control of retrotransposition in Arabidopsis. Nature 461 (7262), pp. 427 - 430 (2009)

Schneeberger, K.; Hagmann, J.; Ossowski, S.; Warthmann, N.; Gesing, S.; Kohlbacher, O.; Weigel, D.: Simultaneous alignment of short reads against multiple genomes. Genome Biology 10 (9), R98 (2009)

Schneeberger, K.; Ossowski, S.; Lanz, C.; Juul, T.; Petersen, A.; Nielsen, K.; Jørgensen, J.-E.; Weigel, D.; Andersen, S.: SHOREmap: simultaneous mapping and mutation identification by deep sequencing. Nature Methods 6 (8), pp. 550 - 551 (2009)

Sureshkumar, S.; Todesco, M.; Schneeberger, K.; Harilal, R.; Balasubramaniam, S.; Weigel, D.: A genetic defect caused by a triplet repeat expansion in Arabidopsis thaliana. Science 323 (5917), pp. 1060 - 1063 (2009)

Fenselau de Felippes, F.; Schneeberger, K.; Dezulian, T.; Huson, D.; Weigel, D.: Evolution of Arabidopsis thaliana microRNAs from random sequences. RNA: A Publication of the RNA Society 14 (12), pp. 2455 - 2459 (2008)

Ossowski, S.; Schneeberger, K.; Clark, R.; Lanz, C.; Warthmann, N.; Weigel, D.: Sequencing of natural strains of Arabidopsis thaliana with short reads. Genome Research 18 (12), pp. 2024 - 2033 (2008)

De Bona, F.; Ossowski, S.; Schneeberger, K.; Rätsch, G.: Optimal spliced alignments of short sequence reads. Bioinformatics 24 (16), pp. i174 - i180 (2008)

Zeller, G.; Clark, R.; Schneeberger, K.; Bohlen, A.; Weigel, D.; Rätsch, G.: Detecting polymorphic regions in Arabidopsis thaliana with resequencing microarrays. Genome Research 18 (6), pp. 918 - 929 (2008)

Rowan, B.; Patel, V.; Weigel, D.; Schneeberger, K.: Advances in crossover localization and QTL mapping using high-throughput sequencing. In 25th International Conference on Arabidopsis Research (ICAR 2014), 375, p. 176. 25th International Conference on Arabidopsis Research (ICAR 2014), Vancouver, Canda, July 28, 2014 - August 01, 2014. (2014)

Rowan, B.; Bomblies, K.; Schneeberger, K.; Ossowski, S.; Lanz, C.; Weigel, D.: Natural modifiers of hybrid necrosis in Arabidopsis thaliana. In 13th Congress of the European Society for Evolutionary Biology (ESEB 2011), p. 991. 13th Congress of the European Society for Evolutionary Biology (ESEB 2011), Tübingen, Germany, August 20, 2011 - August 25, 2011. (2011)

Fenster, C.; Rutter, M.; Roles, A.; Conner, J.; Shaw, R.; Schneeberger, K.; Ossowski, S.; Weigel, D.: Spontaneous mutations and fitness. In Evolution 2011, 044006. Evolution 2011, Norman, OK, USA, June 17, 2011 - June 21, 2012. (2011)

Schneeberger, K.; Ossowski, S.; Lanz, C.; Juul, T.; Høgh Petersen, A.; Lehmann Nielsen, K.; Jørgensen, J.; Weigel, D.; Uggerhøj Andersen, S.: Next-generation genetics: mapping and mutant identification in one step by deep sequencing. In 20th International Conference on Arabidopsis Research (ICAR 2009), C01, p. 52. 20th International Conference on Arabidopsis Research (ICAR 2009), Edinburgh, UK, June 30, 2009 - July 04, 2009. (2009)

Schneeberger, K.; Ossowski, S.; Ott, F.; Lanz, C.; Alonso-Blanco, C.; Schmid, K.; Weigel, D.: One genome is not enough: Genome-species genome variation in Arabidopsis thaliana. In 20th International Conference on Arabidopsis Research (ICAR 2009), C15, p. 66. 20th International Conference on Arabidopsis Research (ICAR 2009), Edinburgh, UK, June 30, 2009 - July 04, 2009. (2009)

Out, A.; van Minderhout, I.; Ariyurek, Y.; Tops, C.; van Galen, M.; Goeman, J.; Taschner, P.; Schneeberger, K.; Ossowski, S.; Breuning, M. et al.; van Ommen, G.; den Dunnen, J.; Devilee , P.; Hes, F.: Estimation of mUtYH variant frequencies in pooled DNA with massive parallel sequencing. In European journal of human genetics, 17 (Supplement 2), C01.5, p. 16. European Human Genetics Conference (ESHG 2009), Wien, Austria, May 23, 2009 - May 26, 2009. Nature Publishing Group (2009)

De Bona, F.; Ossowski, S.; Schneeberger, K.; Rätsch, G.: Optimal spliced alignments of short sequence reads. In BMC Bioinformatics, 9 (Supplement 10), O7. Fourth International Society for Computational Biology Student Council Symposium (ISCB 2008) , Toronto, Canada, July 18, 2008. BioMed Central (2008)