Publications of RE Ley
All genres
Journal Article (154)
21.
Journal Article
24 (9), pp. 3966 - 3984 (2022)
Incorporating genome-based phylogeny and functional similarity into diversity assessments helps to resolve a global collection of human gut metagenomes. Environmental Microbiology 22.
Journal Article
7 (7), pp. 986 - 1000 (2022)
Characterization of inositol lipid metabolism in gut-associated Bacteroidetes. Nature Microbiology 23.
Journal Article
30 (5), pp. 627 - 638 (2022)
The developing infant gut microbiome: A strain-level view. Cell Host & Microbe 24.
Journal Article
162 (3), pp. 743 - 756 (2022)
Randomized Controlled-Feeding Study of Dietary Emulsifier Carboxymethylcellulose Reveals Detrimental Impacts on the Gut Microbiota and Metabolome. Gastroenterology 25.
Journal Article
185 (3), pp. 416 - 418 (2022)
Microbiome engineering: Taming the untractable. Cell 26.
Journal Article
119 (2), e2120125118 (2022)
Microbes set the (woodrat) menu: Host genetics control diet-specific gut microbes. Proceedings of the National Academy of Sciences of the United States of America 27.
Journal Article
97, 108808 (2021)
The microbiome affects liver sphingolipids and plasma fatty acids in a murine model of the Western diet based on soybean oil. The Journal of Nutritional Biochemistry 28.
Journal Article
6 (11), pp. 1443 - 1454 (2021)
Vertebrate host phylogeny influences gut archaeal diversity. Nature Microbiology 29.
Journal Article
6 (5), e00707-21 (2021)
Blowing Hot and Cold: Body Temperature and the Microbiome. mSystems 30.
Journal Article
9, e12198 (2021)
Struo2: efficient metagenome profiling database construction for ever-expanding microbial genome datasets. PeerJ 31.
Journal Article
2, uqab010 (2021)
MicroRNAs and extracellular vesicles in the gut: new host modulators of the microbiome? microLife 32.
Journal Article
71 (4), 004774 (2021)
Reclassification of Catabacter hongkongensis as Christensenella hongkongensis comb. nov. based on whole genome analysis. International Journal of Systematic and Evolutionary Microbiology 33.
Journal Article
6 (2), e00258-21 (2021)
Free-Living, Psychrotrophic Bacteria of the Genus Psychrobacter Are Descendants of Pathobionts. mSystems 34.
Journal Article
6 (1), e00939-20 (2021)
Genomic Insights into Adaptations of Trimethylamine-Utilizing Methanogens to Diverse Habitats, Including the Human Gut. mSystems 35.
Journal Article
370 (6521), eaaz6827, p. 9 (2020)
The role of the microbiota in human genetic adaptation. Science 36.
Journal Article
5 (6), e01045-20 (2020)
Large-Scale Metagenome Assembly Reveals Novel Animal-Associated Microbial Genomes, Biosynthetic Gene Clusters, and Other Genetic Diversity. mSystems 37.
Journal Article
5 (5), e00911-20 (2020)
Strain-Level Analysis of Bifidobacterium spp. from Gut Microbiomes of Adults with Differing Lactase Persistence Genotypes. mSystems 38.
Journal Article
15 (8), e0236703 (2020)
Epidemiology and associated microbiota changes in deployed military personnel at high risk of traveler's diarrhea. PLoS One 39.
Journal Article
11, 2471 (2020)
Sphingolipids produced by gut bacteria enter host metabolic pathways impacting ceramide levels. Nature Communications 40.
Journal Article
36 (10), pp. 3011 - 3017 (2020)
DeepMAsED: evaluating the quality of metagenomic assemblies. Bioinformatics